Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3734 |
Symbol | |
ID | 5871527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4157159 |
End bp | 4158211 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548856 |
Product | hypothetical protein |
Protein accession | YP_001669960 |
Protein GI | 167034729 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAACA ATGATCGCCT GCTGGTCCAG ATTCTGCTGC TGGCGTTGCT GGGTGCCGGC CTTTGGGTGA TGGCGCCCTT CATTTCGGCG TTGCTGTGGG GGGCCATCCT GGCCTTTGCC AGTTGGCCGT TGATGCGCCT GCTGACGCGC TTGCTGGGCG GACGTGAGAC GCTGGCGGCC AGCCTGCTGA CCACGGCCTG GATCCTGATC GTGGCACTCC CGTTGGTGTG GCTAGGGTTC AACCTGGCCG ATCATATTCG CGATGCCACG GCGTTTGTAC GTGACGTGCA GGTCGACGGC TTGCCCGAAG CGCCGGCCTG GCTGGGAGGC ATTCCGTTCG TCGGTGAGCG CCTGGTCAAC TGGTGGCAAT CGCTCGACCA ACAGGGCGCG GCCTTGCTCG CTTCGGCCAA GCCATACTTC GGGCAGGTGG GCAACTGGTT GCTGGCGCGC AGCGCACAGA TCGGCAGCGG TGTGCTGGAA CTGACCCTGA GCCTGGTGTT CGTGTTCTTC TTCTACCGCG ACGGGCCACG CCTGGCGGCC TTCGTATTGC GCTTGTTGCA CCGGCTGATG GGCGAGCGTG CCGAGTATTA CCTGCAACTG GTTGCCGGCA CCGTGCAGCG GGTGGTCAAC GGGGTGATCG GCACGGCGGC CGCACAGGGC CTGCTGGCGC TCATCGGCTT CCTGATCGCC GGGGTGCCCG GGGCGATCGT GCTGGGCCTG GTGACCTTCA TGCTCAGCCT GATCCCCATG GGCCCGCCAC TGGCCTGGAT CCCGGCCACC GGTTGGCTGG TGTGGAAGGG CGAGTACGGC ATGGCGGTGT TCCTGGGTAT CTGGGGTACC TTCGTCATCA GCGGCGTGGA CAACGTGCTC AAGCCCTACC TGATCAGCCG TGGCGGCAAC CTGCCGCTGG TGATCGTGTT GCTGGGCGTG TTCGGTGGCT TGCTTGCCTT TGGCTTCATT GGCTTGTTCA TCGGGCCGAC CTTGCTGGCG GTCGGTTACA GCCTGCTGCT GGACTGGAGC CGTAACGCCG CACAGCAGCC ACCCCAGCAG TAA
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Protein sequence | MVNNDRLLVQ ILLLALLGAG LWVMAPFISA LLWGAILAFA SWPLMRLLTR LLGGRETLAA SLLTTAWILI VALPLVWLGF NLADHIRDAT AFVRDVQVDG LPEAPAWLGG IPFVGERLVN WWQSLDQQGA ALLASAKPYF GQVGNWLLAR SAQIGSGVLE LTLSLVFVFF FYRDGPRLAA FVLRLLHRLM GERAEYYLQL VAGTVQRVVN GVIGTAAAQG LLALIGFLIA GVPGAIVLGL VTFMLSLIPM GPPLAWIPAT GWLVWKGEYG MAVFLGIWGT FVISGVDNVL KPYLISRGGN LPLVIVLLGV FGGLLAFGFI GLFIGPTLLA VGYSLLLDWS RNAAQQPPQQ
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