Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3720 |
Symbol | |
ID | 5871513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4136911 |
End bp | 4137984 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548842 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001669946 |
Protein GI | 167034715 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00285143 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCT ACATCCTGCG CCGCCTGCTG CTGATCATCC CGACCCTATT CGGCATCCTC ATCATCAACT TCATCATCGT TCAGGCCGCC CCCGGCGGCC CGGTCGAGCA GATGATCGCC AAGCTCGAAG GCTTCGAAGG CGCGACCAGC CGCATCGCCG GTGGCGGCGC CGAGGTTTCC GTGGCCGGTT CCAACTACCG CGGTGCACAG GGCCTGGACC CGGCGCTGAT CGCTGAAATC GAGCGCATGT ACGGCTTCGA CAAGTCGCCG CCCGAGCGCC TGTGGATCAT GATCAAGAAC TACGCCCAGC TCGACTTTGG CGACAGCTTC TTCCGCGATG CCAAGGTCAT CGACCTGATC ATCGAGAAGA TGCCAGTGTC GATCTCGCTA GGGCTGTGGA GCACGCTGAT CATGTACCTG GTGTCGATCC CGCTGGGCAT CGCCAAGGCG GTGCGCCATG GCAGCCACTT CGACGTGTGG ACCAGTTCGG CGATTATCGT CGGCTACGCC ATCCCGGCGT TCCTGTTCGC TATCCTGCTG ATCGTGCTGT TTGCCGGCGG CAGCTACTTC GACTGGTTCC CGCTGCGTGG CCTCACCTCC AACAACTTCG ATGAGCTGAG TACCACCGGT AAAGTACTGG ATTACTTCTG GCACCTGGTG TTGCCGATCA CCGCGCTGGT CATTGGCAAC TTCGCCACCA TGACCCTGCT GACCAAGAAC AGCTTCCTCG ACGAAATCAA CAAACAATAC GTGGTCACCG CCAAGGCCAA AGGCTTGAAC CGGTCACGGG TGCTGTACGG CCACGTGTTC CGCAACGCCA TGCTGTTGGT GATCGCCGGT TTCCCCTCGG CGTTCATCGG CATCTTCTTC ACCGGCTCCT TGCTGATCGA GGTGATCTTC AGCCTTGACG GCCTGGGCCT GATGAGTTTC GAGGCGGCCA TCAACCGCGA CTACCCGGTG GTCTTCGGCA CCCTGTTCAT CTTCACCCTG CTGGGGCTGG TGGTGAAACT GATCGGCGAC CTGACCTACA CCCTGGTCGA CCCACGCATC GACTTCGCCA GCCGGGAGCA CTGA
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Protein sequence | MLAYILRRLL LIIPTLFGIL IINFIIVQAA PGGPVEQMIA KLEGFEGATS RIAGGGAEVS VAGSNYRGAQ GLDPALIAEI ERMYGFDKSP PERLWIMIKN YAQLDFGDSF FRDAKVIDLI IEKMPVSISL GLWSTLIMYL VSIPLGIAKA VRHGSHFDVW TSSAIIVGYA IPAFLFAILL IVLFAGGSYF DWFPLRGLTS NNFDELSTTG KVLDYFWHLV LPITALVIGN FATMTLLTKN SFLDEINKQY VVTAKAKGLN RSRVLYGHVF RNAMLLVIAG FPSAFIGIFF TGSLLIEVIF SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLVVKLIGD LTYTLVDPRI DFASREH
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