| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3691 |
|---|
| Symbol | |
|---|
| ID | 5871484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4106074 |
|---|
| End bp | 4106487 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641548814 |
|---|
| Product | NADH dehydrogenase subunit A |
|---|
| Protein accession | YP_001669918 |
|---|
| Protein GI | 167034687 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.771422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CGGCAGGACT CATCGCCCAC AACTGGGGCT TTGCCATCTT CCTCCTGGGT
GTCGTCGGCC TGTGTGCCTT CATGCTCGGC CTGTCCAGCC TGCTCGGTAG CAAGGCCTGG
GGCCGCGCCA AGAACGAACC CTTCGAATCC GGCATGCTGC CCGTCGGCAG CGCCCGCCTG
CGCCTGTCCG CCAAATTCTA TCTGGTCGCG ATGCTGTTCG TGATCTTCGA TATCGAAGCC
CTCTTTCTCT TTGCATGGTC TGTGTCCGTC CGCGAAAGCG GCTGGACCGG GTTCGTCGAA
GCTCTCGTTT TCATAGCAAT TCTGTTGGCA GGTCTTGTCT ACCTATGGCG CGTCGGTGCT
CTTGATTGGG CTCCCGAAGG TCGCCGCAAG CGGCAAGCGA AGCTGAAACA ATGA
|
|---|
| Protein sequence | MSDSAGLIAH NWGFAIFLLG VVGLCAFMLG LSSLLGSKAW GRAKNEPFES GMLPVGSARL
RLSAKFYLVA MLFVIFDIEA LFLFAWSVSV RESGWTGFVE ALVFIAILLA GLVYLWRVGA
LDWAPEGRRK RQAKLKQ
|
|---|
| |