Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3687 |
Symbol | |
ID | 5871480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4102282 |
End bp | 4103607 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548810 |
Product | isocitrate lyase |
Protein accession | YP_001669914 |
Protein GI | 167034683 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.978448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.141916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA CACGCGAACA GCAAATTGCA GCCCTCGAGA AAGACTGGGC CGAGAACCCG CGCTGGAAAG GCGTGACCCG TACCTACACC GCCGCTGATG TCGTTCGCCT GCGTGGCTCC CTGCAGCCAG AGCACACCCT GGCCCGTCAG GGTGCAGAAA AACTGTGGAA GCTGGTCACC CAAGGTGCCC ACCCATCCTT CCGCCCAGAA AAAGATTTCG TCAACTGCAT GGGCGCCCTG ACCGGTGGCC AGGCAGTGCA GCAGGTCAAG GCCGGCATCC AGGCCATCTA CCTGTCCGGC TGGCAGGTTG CCGCCGACAA CAACTCGGCC GAGTCGATGT ACCCTGACCA GTCGTTGTAC CCGGTCGACT CGGTACCGAC CGTGGTCAAG CGCATCAACA ACTCGTTCCG CCGCGCCGAC CAGATCCAGT GGAAAGCCGG CAAGAACCCA GGCGACGAAG GCTACATCGA CTACTTCGCA CCAATCGTGG CCGACGCTGA AGCCGGTTTC GGCGGCGTAC TGAACGCCTA CGAGCTGATG AAGAACATGA TCGAAGCAGG CGCCGCCGGC GTGCACTTCG AAGACCAGCT GGCCTCGGTG AAAAAATGCG GCCACATGGG CGGCAAGGTA CTGGTACCCA CCCAGGAAGC CGTACAGAAG CTGGTGGCCG CGCGCCTGGC AGCTGACGTG TCGGGCGTAC CGACCATCAT CCTGGCCCGC ACCGACGCCA ACGCCGCCGA CCTGCTGACC AGCGACTGCG ACCCCTACGA CCAGCCGTTC GTGATTGGCG AGCGTACCCG TGAAGGCTTC TACAAGGTAC GTGCCGGCCT CGACCAGGCA ATTTCCCGCG GCCTGGCCTA CGCGCCGTAC GCCGACCTGA TCTGGTGTGA AACCGCCAAG CCGGACCTGG ACGAAGCCCG CCGCTTCGCC GAAGCGATCA AGAAGGAATA CCCGGACCAG ATCCTGTCGT ACAACTGCTC GCCGTCCTTC AACTGGAAGA AGAACCTGGA CGATGCCACC ATCGCCAAAT TCCAGCGCGA GCTGTCGGCC ATGGGCTACA AACACCAGTT CATCACCCTG GCTGGCATCC ACAACATGTG GCACGGCATG TTCAACCTGG CGCACGACTA CGCCCGCAAC GACATGACCG CCTACGTGAA ACTGCAAGAG CAGGAGTTCG CTGACGCCAG CAAAGGCTAC ACCTTCGTGG CGCACCAGCA GGAAGTGGGC ACCGGCTACT TCGACGACAT GACCACCGTG ATCCAGGGTG GCGCATCGTC GGTGACTGCA CTGACCGGCT CCACCGAGGA AGAGCAGTTC CACTGA
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Protein sequence | MALTREQQIA ALEKDWAENP RWKGVTRTYT AADVVRLRGS LQPEHTLARQ GAEKLWKLVT QGAHPSFRPE KDFVNCMGAL TGGQAVQQVK AGIQAIYLSG WQVAADNNSA ESMYPDQSLY PVDSVPTVVK RINNSFRRAD QIQWKAGKNP GDEGYIDYFA PIVADAEAGF GGVLNAYELM KNMIEAGAAG VHFEDQLASV KKCGHMGGKV LVPTQEAVQK LVAARLAADV SGVPTIILAR TDANAADLLT SDCDPYDQPF VIGERTREGF YKVRAGLDQA ISRGLAYAPY ADLIWCETAK PDLDEARRFA EAIKKEYPDQ ILSYNCSPSF NWKKNLDDAT IAKFQRELSA MGYKHQFITL AGIHNMWHGM FNLAHDYARN DMTAYVKLQE QEFADASKGY TFVAHQQEVG TGYFDDMTTV IQGGASSVTA LTGSTEEEQF H
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