Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3647 |
Symbol | |
ID | 5871439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4050463 |
End bp | 4051446 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548769 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001669874 |
Protein GI | 167034643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.668107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.648492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGG GAATCGTCGG GCTGGGCCGC ATGGGCGGCA ACATCGCAAG GCGCCTGATG CGCGCCGGCC ATCGCACCGT GGTACACGAC CGCAACCGTG AAGCCATCAC TGGGCTGGAG GGCGAGGGCG CCCAGGGCGC GCACGACCTC GGTGCACTGG TACAAAAGCT GAAAGCGCCG CGTGCCGTAT GGGTGATGCT GCCGGCCGGC GAGCCCACCG AGCAAACCAT CGCCCAATTG GCCGAGCTGC TGGAGCCGGG CGATGCGATC ATCGACGGCG GCAACACCTT CTACAAGGAC GACATGCGCC GCGCCGCAGA ACTGGCCAAG CGCGGCCTGC ATTACCTGGA CGTCGGTACC TCCGGCGGCG TATGGGGCCT GGACCGTGGC TACTGCATGA TGATCGGTGG CGAAAAGGAC GTGTTCGAGC GCCTGGAGCC CCTGTTCAAG GCGCTGGCGC CAGGCGTGGG TGACATCCCG CGTACCCATG GCCGCAGCGG CGAGCACCAG CGGGCCGAAC ACGGCTATAT CCACGCCGGC CCACCTGGCG CCGGGCACTA CGTGAAAATG GTGCACAACG GTATCGAGTA CGGCTTGATG CAGGCTTATG CCGAAGGCTT CGACCTGCTG CGCAGCAAAG GCGGCGACGA GCTGCCGGAA GACCAGCGCT TTGACCTGAA CGTGGCCGAA ATCGCCGAAG TGTGGCGGCG CGGCAGCGTG GTGACCTCGT GGCTGCTCGA CCTTACCGCC GATGCGCTGG TGGCCGACCC GCAGCTGTCG CAGTTCAGTG GCTCGGTGTC CGACAGTGGC GAAGGCCGCT GGACCATCGA CGCTGCGGTC GAGCAGGCGG TGCCGGTGCC GGTGTTGTCC AGCGCATTGT TCGCGCGCTT CCGCTCGCGC CAGCAGCAGG GTACTTATGG TGACAAGATT CTCTCGGCCA TGCGCCTGGG CTTCGGTGGC CACGTCGAGA AGAAAGCCGA ATGA
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Protein sequence | MQLGIVGLGR MGGNIARRLM RAGHRTVVHD RNREAITGLE GEGAQGAHDL GALVQKLKAP RAVWVMLPAG EPTEQTIAQL AELLEPGDAI IDGGNTFYKD DMRRAAELAK RGLHYLDVGT SGGVWGLDRG YCMMIGGEKD VFERLEPLFK ALAPGVGDIP RTHGRSGEHQ RAEHGYIHAG PPGAGHYVKM VHNGIEYGLM QAYAEGFDLL RSKGGDELPE DQRFDLNVAE IAEVWRRGSV VTSWLLDLTA DALVADPQLS QFSGSVSDSG EGRWTIDAAV EQAVPVPVLS SALFARFRSR QQQGTYGDKI LSAMRLGFGG HVEKKAE
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