| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3619 |
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| Symbol | mnmA |
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| ID | 5871411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4020711 |
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| End bp | 4021835 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548741 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001669846 |
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| Protein GI | 167034615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.313741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC CAGCACTCAA AGACCCCGCC AAGACCCGCG TCATCGTCGG CATGTCCGGC
GGCGTGGACT CTTCCGTCTC CGCCCTTCTG CTCATCGAGC AGGGCTACCA GGTGGAAGGG
CTGTTCATGA AGAACTGGGA AGAAGACGAC GGCACCGAAT ACTGCACCGC CCGTGAAGAC
CTGGCCGACG CCCAGGCCGT GTGCGACCGC ATCGGTATCA AGCTGCACAC CGCCAACTTC
GCCGCCGAAT ACTGGGACAA CGTGTTCGAG CACTTCCTTG AAGAATACAA GGCCGGCCGC
ACGCCCAATC CGGACATCCT CTGCAACCGC GAAATCAAGT TCAAGGCGTT TCTCGACTAC
GCCCTGTCGC TGGGTGCCGA CCTGATCGCC ACCGGCCACT ACGTGCGCCG CCGCGACACT
GGCGACCTCA CCGAACTGCT CAAGGGCCTG GACCCGAACA AGGACCAGAG CTACTTCCTG
CACGCCGTTG GCGGCAAGGA AATTGCCCGC ACCCTATTCC CGGTCGGCGA GCTGGAAAAA
CCCGAAGTGC GCGCCATCGC CGAAAAACAC GGCCTGGCCA CCGCCAAGAA AAAGGACTCC
ACCGGCATCT GCTTCATTGG CGAGCGTCGT TTCAGCGATT TCCTCAAGCA GTACCTGCCA
GCTCAGCCGG GTGACATCGA AACCACCGAA GGTGAAGTGA TCGGCCGCCA CCACGGCCTG
ATGTACCACA CCATCGGCCA GCGGCAGGGC CTGGGCATTG GCGGCCTGAA GGATGCCGGT
GACGAGCCGT GGTACGTGTT GCACAAGGAC CTGACCCGCA ATGTGCTGGT GGTTGGCCAA
GGCAACGAAC ACCCATGGCT GTTCTCCCGC GCCCTGCTGG CTTCGGAAAT TTTCTGGGTG
AACCCGATCG ACCTCAGCAG CCCGCGCCAG CTCACCGCCA AGGTGCGTTA CCGCCAAAGC
GACCAGCAGT GCACCCTCGA ACTGACCGAA ACCGGCTACC GCGCCGTGTT CGACGAGCCA
CAGCGCGCCG TCACCCCAGG CCAGTCGGTG GTGTTCTACG ACGGTGAAGT GTGCCTGGGC
GGTGGTGTAA TCGAAGCCGC CGAGCCGTGG AGCCCGCGCG CATGA
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| Protein sequence | MTSPALKDPA KTRVIVGMSG GVDSSVSALL LIEQGYQVEG LFMKNWEEDD GTEYCTARED
LADAQAVCDR IGIKLHTANF AAEYWDNVFE HFLEEYKAGR TPNPDILCNR EIKFKAFLDY
ALSLGADLIA TGHYVRRRDT GDLTELLKGL DPNKDQSYFL HAVGGKEIAR TLFPVGELEK
PEVRAIAEKH GLATAKKKDS TGICFIGERR FSDFLKQYLP AQPGDIETTE GEVIGRHHGL
MYHTIGQRQG LGIGGLKDAG DEPWYVLHKD LTRNVLVVGQ GNEHPWLFSR ALLASEIFWV
NPIDLSSPRQ LTAKVRYRQS DQQCTLELTE TGYRAVFDEP QRAVTPGQSV VFYDGEVCLG
GGVIEAAEPW SPRA
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