| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3617 |
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| Symbol | |
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| ID | 5871409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4017764 |
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| End bp | 4019989 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548739 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001669844 |
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| Protein GI | 167034613 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.162405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC GTTCCAAGAT CATCTATACC TTCACCGACG AAGCCCCCGC CCTCGCCACC
TACTCGCTGC TGCCGATCGT CGAAGCTTTC ACAGCTTGCG CTGACATCGC CGTCGAAACT
CGCGACATCT CCCTGGCTGG CCGTATCCTT GCCGCCTTCC CGGAGCAACT GGGCGCAGAG
AAGCGAGTAG GCGATCACCT GGCGGAACTG GGCCAGCTGG CTACCACCCC TGAAGCCAAC
ATCATCAAGC TGCCGAACAT CAGCGCCTCG GTACCGCAGC TCAAAGCCGC GATCAAGGAA
CTGCAAGGCA AGGGCTTCAA CATCCCTGAC TACGCCGACG AGCCGGCCAC CGCGGACGAG
AAAGAGTCCC GCGCCCGCTA CGACCGCATC AAGGGTTCCG CCGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCCCG CAAGCACCCG
CACAAGATGG GCGCTTGGGC CGCCGACTCC AAGTCGCACG TTGCCCACAT GACCCAAGGC
GATTTCTACG GCAGCGAGAA GGCCGCACTG ATCGAAGGTG ACGACAGCCT GCGCATCGAG
CTGGTCGGCA ACGATGGCAG CACCACCGTG CTGAAAGAAA AGACCGCCGT CAAAGCCGCC
GAAATCATCG ACTGCGCCAC CATGAGCCGC AAGGCCCTGA AAGCCTTCAT CGCCGAGCAG
ATCGCCGATG CCAAGGCTTC TGGCGTGCTG CTGTCGGTTC ACCTGAAAGC CACCATGATG
AAGGTCTCCG ACCCAATCAT GTTCGGCGTC ATCGTCGAAG AGTTCTACAA CGACGTGCTG
GCCAAGCACG CCGCAGCACT GGCCGAAGTG GGCTTCAACG CCAACAACGG TATCGGTGAC
CTGTACGCCC GCATCAAGGA CCTGCCAGCT GACAAGCAGG CCGAGATCGA AGCCGACATC
CAGGCCCTGT ACGCCGACCG CCCAGCCCTG GCCATGGTCA ACTCCGACAA AGGCATCACC
AACCTGCACG TGCCGAGCGA CGTTATCGTC GACGCCTCGA TGCCAGCCAT GATCCGTGAC
TCGGGCAAGA TGTGGAACAC CGCTGGCGAA CTGCAAGACG CCAAGGCCGT GATCCCGGAC
CGCTGCTACG CCGGCATCTA CCAGGCCACC ATCGAAGACT GCAAGAAACA CGGCGCCTTC
GACCCGACCA CCATGGGCAG CGTGCCGAAC GTTGGCCTGA TGGCGCAAAA GGCCGAAGAG
TACGGCTCCC ACGACAAGAC CTTCCAGATC AAGGCCGACG GCGTCGTGCG CGTGGTCGAT
GGCAAGGGCA ACGTCGTGCT GGAACAGAAC GTCGAAGCCG GTGACATCTT CCGCATGTGC
CAGACCAAAG ACGCTCCGAT CCAGGATTGG GTCAAGCTGG CCGTCAACCG CGCCCGCCTG
AGCGACACCC CGGCGGTGTT CTGGCTGGAC CCGGCTCGCG CCCACGACGG TGTGATGATC
GAGAAGGTAC AGAAGTACCT GAAAGATCAC GACACCACTG GCCTGGACAT CCGCGTACTG
GCTCCGGTCG ACGCCATCAA GTTCTCCCTG GCCCGCATCC GCGAAGGCAA GGACACCATC
TCGGTGACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTG
GGCACCAGCG CCAAGATGCT GTCGATCGTG CCGCTGATGA ACGGCGGTGG CCTGTTCGAA
ACCGGCGCCG GCGGTTCGGC GCCCAAGCAC GTACAGCAGC TGGTTGAAGA GAACTTCCTG
CGTTGGGACT CGCTGGGTGA ATTCCTGGCC CTGGCCGCTT CCCTGGAGCA CCTGGGCAAC
ACCTACGACA ACCCGCGCGC CAAGGTTCTG GCCAACACCC TGGACCAGGC TACCGGCAAG
TTCCTCGACA CCAACAAGTC GCCGTCGCGC AAGGTCGGTG GTATCGACAA CCGCGGCAGC
CACTTCTACC TGACTCTGTA CTGGGCTGAA GCCCTGGCCG CTCAGGCTGA CGACGCTGCC
CTGCAGGCAC GCTTCGCACC GCTGGCAAAA ACCCTGGCCG AGAACGAAGC GACCATCGTC
GCCGAGCTCA ATGCCGTTCA GGGCAAGCCA GCCGACATCG GTGGTTACTA CGCCCCGGAT
GCCGAGCTGA CCGCCAAGGT GATGCGCCCA AGCCAGACCC TGAACAGCGC CATTGCCGCC
CTGTAA
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| Protein sequence | MPTRSKIIYT FTDEAPALAT YSLLPIVEAF TACADIAVET RDISLAGRIL AAFPEQLGAE
KRVGDHLAEL GQLATTPEAN IIKLPNISAS VPQLKAAIKE LQGKGFNIPD YADEPATADE
KESRARYDRI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWAADS KSHVAHMTQG
DFYGSEKAAL IEGDDSLRIE LVGNDGSTTV LKEKTAVKAA EIIDCATMSR KALKAFIAEQ
IADAKASGVL LSVHLKATMM KVSDPIMFGV IVEEFYNDVL AKHAAALAEV GFNANNGIGD
LYARIKDLPA DKQAEIEADI QALYADRPAL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGKMWNTAGE LQDAKAVIPD RCYAGIYQAT IEDCKKHGAF DPTTMGSVPN VGLMAQKAEE
YGSHDKTFQI KADGVVRVVD GKGNVVLEQN VEAGDIFRMC QTKDAPIQDW VKLAVNRARL
SDTPAVFWLD PARAHDGVMI EKVQKYLKDH DTTGLDIRVL APVDAIKFSL ARIREGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMNGGGLFE TGAGGSAPKH VQQLVEENFL
RWDSLGEFLA LAASLEHLGN TYDNPRAKVL ANTLDQATGK FLDTNKSPSR KVGGIDNRGS
HFYLTLYWAE ALAAQADDAA LQARFAPLAK TLAENEATIV AELNAVQGKP ADIGGYYAPD
AELTAKVMRP SQTLNSAIAA L
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