Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3594 |
Symbol | |
ID | 5871385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3995742 |
End bp | 3996383 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548715 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_001669821 |
Protein GI | 167034590 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.575523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.553848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA CCAAAAAGCT CTCCCGCACC GAGATGGCCC AACGCGTGGC CGCAGACATT CAAGAAGGCG CGTACGTAAA CCTGGGCATT GGCGCACCGA CCCTGGTGGC CAACTACCTG GGCGACAAGG AAGTCTTCCT GCACAGCGAG AACGGCCTGC TGGGCATGGG CCCAAGCCCA GCGCCGGGCG AGGAAGACGA TGACCTGATC AACGCCGGCA AGCAGCACGT CACCCTGCTG ACCGGCGGTG CATTCTTCCA CCATGCCGAC TCGTTCTCGA TGATGCGTGG CGGCCACCTG GACATCGCCG TACTGGGCGC CTTCCAGGTG TCGGTCAAGG GCGACCTGGC CAACTGGCAC ACCGGTGCCG AAGGTTCGAT CCCCGCCGTA GGCGGTGCGA TGGACCTGGC CACCGGCGCC CGCCAGGTGT TCGTGATGAT GGACCACCTG ACCAAGACCG GCGAAAGCAA GCTGGTGCCC GCGTGCACCT ACCCGCTGAC CGGTATTGGT TGCGTCAGCC GCATTTACAC CGACCTGGCC GTGCTGGAAG TAACGCCTGA AGGCCTGAAA GTGGTCGAGA TTTGCGCGGA CATCGACTTT GACGAGCTGC AGAAGCTGAG TGGTGTGCCG CTGATCAAGT GA
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Protein sequence | MTITKKLSRT EMAQRVAADI QEGAYVNLGI GAPTLVANYL GDKEVFLHSE NGLLGMGPSP APGEEDDDLI NAGKQHVTLL TGGAFFHHAD SFSMMRGGHL DIAVLGAFQV SVKGDLANWH TGAEGSIPAV GGAMDLATGA RQVFVMMDHL TKTGESKLVP ACTYPLTGIG CVSRIYTDLA VLEVTPEGLK VVEICADIDF DELQKLSGVP LIK
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