Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3590 |
Symbol | |
ID | 5871381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3992080 |
End bp | 3993297 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548711 |
Product | cytosine deaminase |
Protein accession | YP_001669817 |
Protein GI | 167034586 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.682581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.610858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC GTGAGTTCAT CAATGCCATC GACGCCGATG GCCTGCCCCT GCACATCGCC GTAAGCAACG GCCGCATCAG CCACATCGGC CCGCAACGCG CCAGCACACC CGCCCGCGAG ACCATCGACC TTGAAGGCCT GCTGGCGCTC CCCGGCTTCG TCGACGGCCA CATCCACTTG GACAAAAGCT TCGTCGGCGA CCGCTGGCGC CCACACCAAC CCGTCGCCAG CCTGCGTGAG CGCCTGGCCG TTGAAAAACG CGAACTTGCC AGCGCCCCAC CGATCCTCGA GCGCGCCGAC GCGCTGATGC GCCAGGCCGC CTCTTACGGC ACCGTGGCCA TGCGCTGCCA TGTGGACGTG GACGCCACCA CCGGCCTGAC CAACTTGCGC GCCATGCTCG AAGCCCGGGA CACCTGGAAA GACCTGATAG ACATCGAACT TGTGGCCTTC CCCCAGGCCG GTGTGGTGAC CTGCCCCGGC ACTGCCGACG TGATGGAAGC GGCTATACGC GAAGGTGTGC AGGTCGTCGG CGGTATCGAC CCAACCACCC TGGATGGCGA CGCCGAAGCG CAGCTGGACA TCGTGTTCGG CATTGCCGAC CGGCACGGCG TGAAGGTCGA TATCCACCTG CATGAACCCG GCGACATCTG CATCGCCCAG CTTGAACGCA TCGCCGCGCG CACCACCGCC TTGGGCATGC AAGGCTTGGT GGCAGTCAGC CACGCCTATG GCCTGGGCGA TGTATCCGAC GCGGTGGTCG ACCGCACGGC CGAGCTGCTG GCCGGCGCCG GCGTATCGAT CATGACCAAC GCACCCGGCG AACACGCCTT CCCGCCTGTG CTACGCCTGC GTGCAGGCGG TGTGCGGGTG TTCACCGGTA ACGACAATAT CCAGGATGCC TGGTGGCCGT ATGGCAATGG CGACATGCTG CAACGGGCGA TGCTGATCAG CTATCGCTCG GGCTTCAACA CCGACGAAGA ATTGCGGGTT GCGTTGGAAA TGGCCACCGA GGCCAGCGCC GGAGTGATGG GCAAACAAGA CTACGGTTTG AAGGTCGGCA ACGAGGCCAG TTTCGTGCTG TTAAAGGCGC CGAATGCGGC GGCGGCGGTG GCGGCAGCCC TCCATGAACG CGTGATCGTG CGCCACGGCG CATTCTGGGG CGGGCCTGCG CAATTGCGGT TGAAGGCTAC GCAGTTTGCC AACGAGCTGC GCCGTTGA
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Protein sequence | MNDREFINAI DADGLPLHIA VSNGRISHIG PQRASTPARE TIDLEGLLAL PGFVDGHIHL DKSFVGDRWR PHQPVASLRE RLAVEKRELA SAPPILERAD ALMRQAASYG TVAMRCHVDV DATTGLTNLR AMLEARDTWK DLIDIELVAF PQAGVVTCPG TADVMEAAIR EGVQVVGGID PTTLDGDAEA QLDIVFGIAD RHGVKVDIHL HEPGDICIAQ LERIAARTTA LGMQGLVAVS HAYGLGDVSD AVVDRTAELL AGAGVSIMTN APGEHAFPPV LRLRAGGVRV FTGNDNIQDA WWPYGNGDML QRAMLISYRS GFNTDEELRV ALEMATEASA GVMGKQDYGL KVGNEASFVL LKAPNAAAAV AAALHERVIV RHGAFWGGPA QLRLKATQFA NELRR
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