Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3568 |
Symbol | |
ID | 5871359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3968735 |
End bp | 3969640 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548689 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001669795 |
Protein GI | 167034564 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000217515 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.28284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGG ACATGTTGCG AGAAATCCAA GCGTTCGTCA GCGTGGCGCA CAAACGCAGC TTCGTAGCCG CCGCCCGTGC ACTGGGGCGC TCACCCAGTG CAGTTACGCG CGCGGTGCAA ACCCTGGAAG ACAATGCCGG CAGCAAGCTG CTCAACCGCA ACGCCAACGC CGTGACCCTG ACCGAAGCCG GCGAGCGCCT GTTGCCACAC GCCGAACGCT TGCTGGATGT GCAACGCGAT GCTGCCGATG AACTGGCCGC GCTAAGCGGC AGCGCCCAGG GCTGGATCCG CTTTGCCGTG CCACAACTGC TGGGGGAACA TGTGCTGCCG CAGGTGCTTG CCGAGTTTTC CCGCTGTCAC CCTCAAGTGA CCCTGGACGT ACAGTGCAGC GACGAAGCCC TCGACCCGCT GCAGGGCAAA TTCGATTTCG TGGTGCGCGG TGCCTTCCCG CAATCGAGCG AACTGATCGG TTATCCGCTG TGGCCCTACC AGCGCCATTT GTATGCCAGC CCGGCGTACC TGGCCCTGGC CGGCACACCG CAGCATCCAG AGGACCTGGA GGGGCATACG CTGATCCTGC ATACCGCGCC ACGTATCCTC AAGGCCTGGC ACTTCTGTCG CGACGGCCAG ATCACCAGCC TGCGCCCCAG GCCCAGGCTG CGCCTGGGCT CGGGTCATGC GGTGTACCAC AGCACCCTGG CCGGCGCCGG TATCGCTCGC CTGGCCGCCT GGGTCGGTGA GGCGCAGGTC AACGTCGGGC GCCTGGTGCG GGTGTGCCCG CATTACCGCC TGACGTCGAG CAGCGGCCAG GACCCACAGA TGCATGCCGT GTACCCTGCT GGCGAGCTGC CGGCGCGGGT GCGTGACTTG CTGGCAGCCC TGCGCCGTGC AGGCATGGGC TGTTGA
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Protein sequence | MALDMLREIQ AFVSVAHKRS FVAAARALGR SPSAVTRAVQ TLEDNAGSKL LNRNANAVTL TEAGERLLPH AERLLDVQRD AADELAALSG SAQGWIRFAV PQLLGEHVLP QVLAEFSRCH PQVTLDVQCS DEALDPLQGK FDFVVRGAFP QSSELIGYPL WPYQRHLYAS PAYLALAGTP QHPEDLEGHT LILHTAPRIL KAWHFCRDGQ ITSLRPRPRL RLGSGHAVYH STLAGAGIAR LAAWVGEAQV NVGRLVRVCP HYRLTSSSGQ DPQMHAVYPA GELPARVRDL LAALRRAGMG C
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