| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3565 |
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| Symbol | |
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| ID | 5871356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3964482 |
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| End bp | 3966311 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548686 |
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| Product | citrate transporter |
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| Protein accession | YP_001669792 |
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| Protein GI | 167034561 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0137837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.113815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG AGCTACTCTG GGTCCTCGGC CTGCTGGCCA TCGTCATTTT CCTCTTCGTC
ATCAACCGCC CACGCATGGA CGTGGTCGCG CTGCTGGTGA TTCTTGCCCT GCCGCTGCTT
GGCATCCTCA CCGTGGAACA GGCCTTGGCC GGTTTCAGCG ACCCCAACGT GGTGCTGATC
GCGGCCCTGT TCGTGATCGG TGAAGGCCTG GTGCGCACCG GCATTGCCTA CCGCATCGGC
GAATGGATGA GCGAGCGGGC CGGCAACAGC GAAGCGCGCC TGTTGGTGCT GCTGATGGTG
GCCGTGGCCG GGCTCGGGTC GATGATGAGT TCTACCGGTG TGGTAGCCAT TTTCATCCCG
GTGGTGCTGA GCATCGCCGC GCGCCTGCAG ATTTCGCCCA GCCGCCTGAT GATGCCACTG
GCCTTTGCCG GCCTCATAAG CGGCATGCTC AGCCTGGTCG CCACACCGCC TAACGTGGTG
GTACACAGCG AGCTGGTACG CAATGGCCAA GCAGGCTTCA GCTTCTTCAG CTTTACCCCG
TTCGGCCTGG TGGTACTGGT GCTGGGCATT GGCTACATGC TGCTGACCCG GCACTGGCTC
AACGGCGAGG TACGCAAGGA CGGCCGGGTG GAAAGCCGCC GCACCCTGCT GGACCTGGTG
CTGGACTACA AGCTCAACGG CCGTGAACGG CGCCTGCGCA TCCGCCCCCA TTCCCCCCTG
ATAGGGCACA CCCTTGGCGA ACTGGAGCTG CGCACCCGGC ACGGCGCCAA CGTGATTGGT
ATCGAACGCC AGCACAAGTT CACCACGCGG GTGATCGCTG CCGACTCCAG TACCGTGCTG
CATCAGGGCG ACGTGCTGCT GCTCGACCTG TTCGCCAACC GCGACGACCT GCGCAGCCTA
TGCCAGGCCA TGCAACTGGA GCCGCTGCAC TTCAAAGCTG CCTACTTCAT CGACCAGTCC
CAAGAGCTTG GCATGGCCGA GGTCTCGCTA CCGCCGGGCT CGCAGCTGAT CGGCAAGAGC
ATCCTCGAAC TGGCGTTTCG CACCCGCTAT GACCTCAACG TGGTCGGCCT GCGCCGTGAG
CAGGCGGCCA TCGAAGAGCA ACTGGTGGAG GAAAAGCTGC GCCTGGGCGA CACCTTGCTG
GTGGTCGGCC CGTGGAAGGC TGTACGCCAG TTGCAAAGCA AGCCCAAAGA CTTCCTGGTA
CTGAGCCTGC CCGCCGAAAT CGACCTGGTC GCCCCCGCCC GCACCCGTGC GCCGCAGGCG
TTGCTGAGCC TGGCGGTGAT GGTCGGGCTG ATGGTCAGCG GCGCGGTGCC CAATGTCATC
GCCGCGCTGA TCGGCTGCCT GTTGATGGGC GCGGGCCGTT GCATCGACAT GAACAGCGCC
TACCGGGCTA TCCACTGGCA AAGCCTGGTG CTGATCGTCG GCATGCTGCC CTTTGCCCAG
GCGCTACAGA AAACCGGCGG TATCGACCTG GCAGTGGGCG GGCTTGTCAG CGTACTGGGC
GGTGCCGGCC CCAGCGCCAT TCTTGCCTGC CTGTTCGCCG TCACGGCGGT GATCGGGTTG
TTTATTTCCA ACACCGCCAC CGCAGTGCTG ATGGCACCGG TGGCCGTCAG CACTGCAGCG
CAGCTGGGCA TGTCGCCCTA CCCATTCGCG ATGACCGTGG CATTGGCCGC GTCGGCGGCA
TTCATGACGC CTATTTCATC GCCGGTCAAC ACGCTGGTGC TGGGTCCGGG GCAATACCGC
TTCGCCGACT TCGTCAAAAT CGGCGTGCCG TTCACCATAC TGGTAATGCT GGTAACCATC
GTGATGGTGC CGTGGTTCTT CGGGCTTTGA
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| Protein sequence | MNQELLWVLG LLAIVIFLFV INRPRMDVVA LLVILALPLL GILTVEQALA GFSDPNVVLI
AALFVIGEGL VRTGIAYRIG EWMSERAGNS EARLLVLLMV AVAGLGSMMS STGVVAIFIP
VVLSIAARLQ ISPSRLMMPL AFAGLISGML SLVATPPNVV VHSELVRNGQ AGFSFFSFTP
FGLVVLVLGI GYMLLTRHWL NGEVRKDGRV ESRRTLLDLV LDYKLNGRER RLRIRPHSPL
IGHTLGELEL RTRHGANVIG IERQHKFTTR VIAADSSTVL HQGDVLLLDL FANRDDLRSL
CQAMQLEPLH FKAAYFIDQS QELGMAEVSL PPGSQLIGKS ILELAFRTRY DLNVVGLRRE
QAAIEEQLVE EKLRLGDTLL VVGPWKAVRQ LQSKPKDFLV LSLPAEIDLV APARTRAPQA
LLSLAVMVGL MVSGAVPNVI AALIGCLLMG AGRCIDMNSA YRAIHWQSLV LIVGMLPFAQ
ALQKTGGIDL AVGGLVSVLG GAGPSAILAC LFAVTAVIGL FISNTATAVL MAPVAVSTAA
QLGMSPYPFA MTVALAASAA FMTPISSPVN TLVLGPGQYR FADFVKIGVP FTILVMLVTI
VMVPWFFGL
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