Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3552 |
Symbol | |
ID | 5871342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3953255 |
End bp | 3953668 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548672 |
Product | DoxX family protein |
Protein accession | YP_001669779 |
Protein GI | 167034548 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.583897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.164311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACT CCCTGTTCGA TGGTCAACGT GACATCATCA TCCTCATCGC CCGCATACTG CTGATGATCC TGTTCGTCTT GTCAGGCTGG GCCAAGCTGA CCGGCTTCGA TGGCACGGTC GGCTACATGA CCTCGCTGGG CGCCCCTGCC CCGATGCTGG CGGCAGCGAT TGCCGTCATC ATGGAGTTCG TCGTCGCCAT CCTGCTGATC CTCGGCTTCT ACACGCGGCC GCTGGCGTTT CTGTTCGCGC TGTTCGTGCT GGGCACGGCG CTGCTCGGCC ACCCGTTCTG GAACATGGTC GACCCCGAAC GCAGCGCCAA CATGACCCAG TTTCTGAAAA ACATGGCCAT CATGGGCGGC TTGCTGCTGC TGGCGGTCAG CGGCCCAGGG CGCTTCTCGG TGGACGGTCG CTGA
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Protein sequence | MRYSLFDGQR DIIILIARIL LMILFVLSGW AKLTGFDGTV GYMTSLGAPA PMLAAAIAVI MEFVVAILLI LGFYTRPLAF LFALFVLGTA LLGHPFWNMV DPERSANMTQ FLKNMAIMGG LLLLAVSGPG RFSVDGR
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