Gene PputGB1_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3552 
Symbol 
ID5871342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3953255 
End bp3953668 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID641548672 
ProductDoxX family protein 
Protein accessionYP_001669779 
Protein GI167034548 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.583897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.164311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACT CCCTGTTCGA TGGTCAACGT GACATCATCA TCCTCATCGC CCGCATACTG 
CTGATGATCC TGTTCGTCTT GTCAGGCTGG GCCAAGCTGA CCGGCTTCGA TGGCACGGTC
GGCTACATGA CCTCGCTGGG CGCCCCTGCC CCGATGCTGG CGGCAGCGAT TGCCGTCATC
ATGGAGTTCG TCGTCGCCAT CCTGCTGATC CTCGGCTTCT ACACGCGGCC GCTGGCGTTT
CTGTTCGCGC TGTTCGTGCT GGGCACGGCG CTGCTCGGCC ACCCGTTCTG GAACATGGTC
GACCCCGAAC GCAGCGCCAA CATGACCCAG TTTCTGAAAA ACATGGCCAT CATGGGCGGC
TTGCTGCTGC TGGCGGTCAG CGGCCCAGGG CGCTTCTCGG TGGACGGTCG CTGA
 
Protein sequence
MRYSLFDGQR DIIILIARIL LMILFVLSGW AKLTGFDGTV GYMTSLGAPA PMLAAAIAVI 
MEFVVAILLI LGFYTRPLAF LFALFVLGTA LLGHPFWNMV DPERSANMTQ FLKNMAIMGG
LLLLAVSGPG RFSVDGR