Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3537 |
Symbol | |
ID | 5871326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3941564 |
End bp | 3942478 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548656 |
Product | cytochrome c class I |
Protein accession | YP_001669764 |
Protein GI | 167034533 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.429309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0523965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCGT TGATTCCAGC CATGTTGCTG CTGGCCGTGG GCAGTGCCCA GGCCGCGCCG ATTGCCATGG AAGACCAGTC GCAGTTGAAA GTGCCCGGCG TGCAGGCTGC GCCGCAGTTC GTACCCCCCG ATGAAAGCGA TTTGCCCGAC AATGCCTTTG GCAAGATGGT GCGCGAAGGC CATGCCTTGT TCGTCGACAC CCGCCGGCTG ATGCCCGAGG CCGTGGGCAA TGGCATGAAC TGCAGCAACT GCCACCTCGA CCAAGGGCGG CTGGCGCATT CAGCACCGAT GTGGGGCGCG TACCCGATGT ACCCGGCTTA CCGCAAGAAG AACGACAAGG TGAATACCTA CGCCGAGCGT ATCCAGGGCT GCTTCCAGTT CAGCATGAAC GGCAAGCCGC CGGCCGCCGA CAGCCCGCAA ATGACGGCGC TGGCGGTGTA CGCCTACTGG CTGTCGACCA AGGCGCCGAC CGGCGTGGAA CTCGCCGGGC GCGGATACCC CGAGGTGGCG CAGCCACAGG GTGGTTATGA CTTCAAGCGT GGCCAGCAGG TTTACCGTGA GCAGTGCGCC ATTTGCCATG GTGACAACGG TGAAGGGCAG CAGGTTGCGG GCGAGTATGT GATGCCGCCG CTGTGGGGCA AGGACTCCTA CAACTGGGGC GCCGGCATGC ACCGCATCAA CACGGCGGCG TCGTTCATCA AGTACAACAT GCCGCTGGGC AAGCCCGGCA GCCTCAGCGA CCAGCAAGCC TGGGACGTGG CGGCGTGGAT CAACCGCCAT GAACGGCCAC AGGACCCTCG CCTGGTAGAG GGTTCCATCG AGAAAACGCG GGTGAAGTTT CATGCCAATG ATGGCGTGAA CCTGTATGGG CAGAAGGTTG ATGGGGTGCT GGTGGGGCAG GGCACTGGAA GTTGA
|
Protein sequence | MKPLIPAMLL LAVGSAQAAP IAMEDQSQLK VPGVQAAPQF VPPDESDLPD NAFGKMVREG HALFVDTRRL MPEAVGNGMN CSNCHLDQGR LAHSAPMWGA YPMYPAYRKK NDKVNTYAER IQGCFQFSMN GKPPAADSPQ MTALAVYAYW LSTKAPTGVE LAGRGYPEVA QPQGGYDFKR GQQVYREQCA ICHGDNGEGQ QVAGEYVMPP LWGKDSYNWG AGMHRINTAA SFIKYNMPLG KPGSLSDQQA WDVAAWINRH ERPQDPRLVE GSIEKTRVKF HANDGVNLYG QKVDGVLVGQ GTGS
|
| |