| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3473 |
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| Symbol | |
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| ID | 5871259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3879960 |
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| End bp | 3881138 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641548589 |
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| Product | integrase family protein |
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| Protein accession | YP_001669700 |
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| Protein GI | 167034469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00115261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCGAA AAACGATCAC CGGCCTCTAC GAGAAGGGCG GTGTCTGGCA AATCGACAAA
GTCTACAAAG GGGAGCGAAT TCGAGAGAGT ACTGGAACTG GTGACCGGGA AGAAGCAGAG
CAGTACCTGA TCCACAAGCT CGAGCAGTTG CGCCAAAGGA AGGTGTATGG CGTTCGGCAG
GTGCACACCT GGGAGGAGGC GGCAATGCGC TACCTCCTTG AGGTCAAGGA TCAGCCATCC
ATTCACCTAA CTGCCTTGTG CATGAAGCAG CTTCACCCAT ACCTGGGCCA CCTGCCGCTG
ACGCATATCG ATGACCAGGC GCTGGAGCCG TTCATCAGGG ATCGGCAGAC AGAAAAGGTT
CTGCCGGATG GGACCATTGA AAAGGCCGTG AGCAACCGAA CGATCAACAT CGCCATCGAG
CGCGCGGTCC GGGTTTTGAC GCTCTGCGCC AGGAAGTGGC GAGACGATGA TCGCCGGCCA
TGGCTGGACA GTGTGCCCAT GCTGAGGAAG CTCGAAGAGA AGAAGTCGAG CCGTAAGCCC
TACCCAATGT CATGGGAAGA GCAGTCGATC CTCTTCAACG AGTTACCGGG CCACCTGCAA
ACGATGGCCC TGTTCAAGGT AAACACGGGC TGCCGGGAGC AGGAGGTGTG CAAGCTGAGG
TGGGATTGGG AGATATCGGT GCCGGAACTG GGTACCAGTG TTTTCCTGAT CCCTGCTGAC
TTCGGCGGGA GACACGCCCG GTCGGGCGTA AAGAATGGCG ACGAGCGCCT AGTGGTGCTG
AACAACGTGG CCAAGTCGAT TATTGAAAGG CAGCGCGGGA TCAGCAAGGA ATGGGTATTT
CCATACAACG GCACCGCGAT GCAACGGATG AACGACTCGG CATGGAAGAA GGCACGGGTG
AGAGCGGCGA AACTCTGGCA GGAGGAAAAC CTTCGCCCCG CTCACCCTGG GTACGCATCA
ATTCGCATCC ACGACCTCAA ACATACATTC GGTCGAAGGC TGCGCGCCGC GGGCGTGACG
GAAGAGGATC GGAAGTCACT GCTCGGGCAC AAGAACGGCA GCATCACCAG CCACTACTCC
GGCGCTGAGC TGGGCAAGCT GATTGAGGCT GCGGACATGG TATCAACAAC TGACTCTCGC
GGGCCGGTGT TGACGATCTT GAAGAGGAAA ATCGGATGA
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| Protein sequence | MARKTITGLY EKGGVWQIDK VYKGERIRES TGTGDREEAE QYLIHKLEQL RQRKVYGVRQ
VHTWEEAAMR YLLEVKDQPS IHLTALCMKQ LHPYLGHLPL THIDDQALEP FIRDRQTEKV
LPDGTIEKAV SNRTINIAIE RAVRVLTLCA RKWRDDDRRP WLDSVPMLRK LEEKKSSRKP
YPMSWEEQSI LFNELPGHLQ TMALFKVNTG CREQEVCKLR WDWEISVPEL GTSVFLIPAD
FGGRHARSGV KNGDERLVVL NNVAKSIIER QRGISKEWVF PYNGTAMQRM NDSAWKKARV
RAAKLWQEEN LRPAHPGYAS IRIHDLKHTF GRRLRAAGVT EEDRKSLLGH KNGSITSHYS
GAELGKLIEA ADMVSTTDSR GPVLTILKRK IG
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