| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3364 |
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| Symbol | |
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| ID | 5871149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3799027 |
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| End bp | 3800439 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548480 |
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| Product | aromatic-L-amino-acid decarboxylase |
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| Protein accession | YP_001669592 |
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| Protein GI | 167034361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.792573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.561482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCCCG AACAATTCCG CCAATACGGC CACCAACTGA TCGACCTGAT CGCCGACTAT
CGCCAAACCG TCGGCGAACG CCCGGTCATG GCCCAGGTCG AACCTGGCTA CCTCAAGGCC
GCTTTGCCCG CAGCCGCGCC CCAGCAAGGC GAACCCTTCG AGGCCATCCT CGACGACGTC
AACCAGCTGG TGATGCCTGG CCTGTCTCAT TGGCAGCACC CGGATTTCTA CGGTTACTTT
CCCTCCAACG GCACCCTGTC CTCGGTACTG GGGGACTTCC TCAGCACCGG CCTGGGTGTG
CTGGGCCTGT CATGGCAATC CAGCCCGGCC CTGAGCGAAC TGGAAGAAAC CACCCTCGAC
TGGCTGCGCC AACTGCTTGG CTTGTCTGGA CAATGGAGCG GGGTCATCCA GGACACCGCT
TCGACCAGCA CGCTGGTAGC GCTTATCAGC GCCCGTGAAC GCGCCACCGA TTACGCCTTG
GTACGCGGTG GCCTGCAGGC TGAAGCCAAG CCTTTGATCG TGTATGTCAG CGCCCATGCC
CACAGCTCGG TGGACAAGGC CGCGCTGCTA GCCGGTTTTG GCCGCGACAA CATCCGGCTT
ATCCCCACTG ACGAGCGTTA CGCGCTGCGC TCCGAGGCGT TGCAGGCGGC GATCGAGCAA
GACCTGGCCG CCGGTAACCA GCCATGCGCC GTAGTTGCCA CCACCGGCAC CACGACGACC
ACTGCCCTCG ACCCGTTGCG CCCGATCGGC GAAATTGCCC AGGCCCATGG CCTGTGGCTG
CATGTTGACT CGGCCATGGC AGGTTCGGCG ATGATTCTGC CCGAGTGCCG CTGGATGTGG
GACGGCATCG AGTTGGCCGA CTCGGTGGTG GTCAATGCCC ACAAGTGGCT GGGTGTGGCC
TTCGATTGCT CGATCTATTA CGTCCGTGAC CCGCAGCACC TGATCCGGGT CATGAGCACC
AACCCCAGCT ACCTGCAGTC GGCGGTGGAC GGCGAGGTGA AGAACCTGCG TGACTGGGGG
ATCCCGTTGG GCCGTCGGTT CCGCGCCCTG AAGCTGTGGT TCATGCTGCG CAGCGAGGGC
GTTGACGCGT TGCAGGCGCG GCTGCGGCGT GACCTGGACA ATGCCCAGTG GTTGGCAGGG
CAGGTGGGGG CTAAAGCAGA GTGGGAAGTG CTGGCGCCGG TGCAATTGCA GACCTTGTGC
ATTCGCCATC GGCCGGCGGG GCTGGAAGGG GAAGCGCTGG ATGCGCATAC CAAGGGTTGG
GCCGAGCGGT TGAATGCGTC TGGGGATGCG TATGTGACGC CGGCGACGCT GGATGGGCGG
TGGATGGTGC GGGTGTCGGT TGGTGCGTTG CCGACTGAGC GGGGGGATGT CGAGCGGCTC
TGGACGCGCT TGCAGGAAGT GGTTGAAGGC TGA
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| Protein sequence | MTPEQFRQYG HQLIDLIADY RQTVGERPVM AQVEPGYLKA ALPAAAPQQG EPFEAILDDV
NQLVMPGLSH WQHPDFYGYF PSNGTLSSVL GDFLSTGLGV LGLSWQSSPA LSELEETTLD
WLRQLLGLSG QWSGVIQDTA STSTLVALIS ARERATDYAL VRGGLQAEAK PLIVYVSAHA
HSSVDKAALL AGFGRDNIRL IPTDERYALR SEALQAAIEQ DLAAGNQPCA VVATTGTTTT
TALDPLRPIG EIAQAHGLWL HVDSAMAGSA MILPECRWMW DGIELADSVV VNAHKWLGVA
FDCSIYYVRD PQHLIRVMST NPSYLQSAVD GEVKNLRDWG IPLGRRFRAL KLWFMLRSEG
VDALQARLRR DLDNAQWLAG QVGAKAEWEV LAPVQLQTLC IRHRPAGLEG EALDAHTKGW
AERLNASGDA YVTPATLDGR WMVRVSVGAL PTERGDVERL WTRLQEVVEG
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