| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3327 |
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| Symbol | |
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| ID | 5871112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3736052 |
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| End bp | 3738451 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548443 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001669555 |
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| Protein GI | 167034324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC TCCCGTTTAC CTTGCGCCCT CTGCTGCTGG CTCTGCCGTT GCTGATCGCC
ACCCCGGTGA TGGCCGACGA CAGCCCGCGC CGCTACGACC TGCCATCCGG CCCGCTGGCC
CAGCAGCTCA ACCGCCTGGC CAGTGCGGCC GGTATCTACA TTGTCGGCGA TGGCGTGCTC
AGCCAAGGCA AGGCCAGCGC ACCGCTGCAA GGCGAATTCA CCCCCGAACA GGCCCTGGAA
CGCATGTTGC TGGGCAGTGG CCTGATCGCC GTGCCCAGCG GCGAACGCCA GTATCGGCTG
CAACCTGCGG CACAAGGTGC GGGCCTGCAA CTGGCGCCCA CCAGCGTCGA TGCCTATCGC
GACAGCGCCT ACGGTGCCGT GAACGGCTAC CTGGCCACCC GCGCCAGCAG CGCCAGCAGC
GCCAGCAAGA CCGACAGCGC GCTGCTGGAA ACCCCCGCCT CGGTGTCGGT GGTGACCCGT
GACCGGATCA AGGCCCAAGG TGCACAGACC GTTACCGAAG CCTTGAGCTA CACCGCTGGC
GTGCACGCCA ACGTCGCTGG CAACAACCCC ACCGACAACA CCTTGATGGT GCGTGGTTTC
CAGCAGATCA ACAGCGATGC CTACACCGAC GGCCTGCGCA ACAACAACAT TGGCTATTAC
GCGCCGGAGC CGTTTGGCCT GGAGCGCATC GAGGTACTCA AAGGGCCGGC GTCGGTTATC
TACGGCCAGG GCGAGCCTGG CGGCATGATC AACCTGGTCT CGAAAAAACC ATTGTTTGCA
GCCCACCGTG AAGTCGGTCT GTCGCTCGGC AATCACGACC GCCAGCAACT GAGCCTGGAT
GTCGGCGACC TGCTCGACAG CCAGGGCACC CTGGCCTACC GCCTGGTGAT GCTCGGCCGT
GATGCCGACA ACGAGATCGA AGGTATCAAG GACGACCGCC AGTACGTCGC GCCCAGCCTG
ACCTGGGCAC CGAATGAAGA CACCAGCCTG ACCCTGCTGG CGTCGTACCA GAAAAACACC
AACCTGTTCA CCTCGAACAT GGCCTACTCC CTGTTCGACG GCTCCAACCC CAACGGCCGC
GTACCCCGCC ACCGCTCGCT GAACGAGCCG GGCTTCGACC GCGAGCAGTC AGAGATGAAC
AACCTGGGCT ATGAGCTGAG CCATCGCATC AACGACACCT TCAGCTTCCG CCAGAACTTA
CGCTACAGCC ACATGCACGG CTATCAGGAT CAACTGTTTC GCAACAGCGG TGTGATCAAT
GGCAACACCC TGGCCCGCTA TTACGAGCTG CGCGATTACA ACAGCGACAA CTACACCCTG
GACAACCAAC TGCTGGCCAA TTTCAACACC GGCCCATTGC GCCATGACCT GTTGCTGGGT
GCCGACTACC TGCGCGGCCA CCGCAGCCAG GACGTGCAGC ACGGCGACGC GCCATCGATC
AACATCTACA ACCCGGTGCG CGGTGTAACG ATCGACACTT CCCGCTACAC CTCACTGCTG
TCCACCGCCC GCGACGACCG TCAGGTCGGG CTGTACCTGC AGGACCAATT GCACCTCGAC
AACTGGGTCG CCACCCTTGG CGTGCGTCAC GACTGGGCGC GCCAGGACAG CACCAATCGC
ATCAATGGCA GCCACCAGGT GATCACCGAC GAGGCCACCA CTGCCCGCGC GTCGTTCGGC
TACAGCTTCG ACATGGGCCT GTTCCCCTAC GTGAGCTACA GCGAGTCGTT CAAACTGGCC
AGTGGCAACA GTTTCGACGG TTCCCCGTTC GAACCGGAAA CAGCCAAGCA ATACGAAGTG
GGCATCAAGT ACCAACCGCC AGGCAGCGAA AACTACATCA CCGTGGCAGC CTTCGACCTG
CGCCGGCAGA ACGTGGCCAC GACCGATGTC GAGCACCTGG GCTTCAGCGT GCAGCAGGGT
GAAGTGACCT CGCGCGGGGT GGAGCTGGAA GGCGTAGCCA AACCGCTGCC GGGGCTGAAC
CTGATCACCG CGTATACCTA CAACGATGTC GAGGTAACCA AGGACAACCC GAACGCGCTG
GGCGTCAGCA ACAAGGGAAA TGCACCGGTG CGGGTCCCAC GTCATCTGGC CTCGCTGTGG
GTCGACTACA CCCTGCAGGG CGGGCCATTG GCCGGGCTTG GCGGCGGCCT TGGCGTGCGC
TACACCGGCG CCACCTCTGG CGATGCGCAG AACACTTTCG AAGTGCCTGG CTACACCTTG
GTCGATGCCA TGCTGTCTTA CGACTTCGGC AAGGCCAACA ACGGCCTGCA GGGCTTGTCG
GCGCAGCTCA ATGTGAAAAA CCTGACCGAC AAGTACTACG TGGCCGGCTG CTTCGCCACC
GTAGCCTGCC TGTTGGGAAC GGGGCGCACC GTAACCGCCG ACCTGACCTA TCGCTGGTAG
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| Protein sequence | MPLLPFTLRP LLLALPLLIA TPVMADDSPR RYDLPSGPLA QQLNRLASAA GIYIVGDGVL
SQGKASAPLQ GEFTPEQALE RMLLGSGLIA VPSGERQYRL QPAAQGAGLQ LAPTSVDAYR
DSAYGAVNGY LATRASSASS ASKTDSALLE TPASVSVVTR DRIKAQGAQT VTEALSYTAG
VHANVAGNNP TDNTLMVRGF QQINSDAYTD GLRNNNIGYY APEPFGLERI EVLKGPASVI
YGQGEPGGMI NLVSKKPLFA AHREVGLSLG NHDRQQLSLD VGDLLDSQGT LAYRLVMLGR
DADNEIEGIK DDRQYVAPSL TWAPNEDTSL TLLASYQKNT NLFTSNMAYS LFDGSNPNGR
VPRHRSLNEP GFDREQSEMN NLGYELSHRI NDTFSFRQNL RYSHMHGYQD QLFRNSGVIN
GNTLARYYEL RDYNSDNYTL DNQLLANFNT GPLRHDLLLG ADYLRGHRSQ DVQHGDAPSI
NIYNPVRGVT IDTSRYTSLL STARDDRQVG LYLQDQLHLD NWVATLGVRH DWARQDSTNR
INGSHQVITD EATTARASFG YSFDMGLFPY VSYSESFKLA SGNSFDGSPF EPETAKQYEV
GIKYQPPGSE NYITVAAFDL RRQNVATTDV EHLGFSVQQG EVTSRGVELE GVAKPLPGLN
LITAYTYNDV EVTKDNPNAL GVSNKGNAPV RVPRHLASLW VDYTLQGGPL AGLGGGLGVR
YTGATSGDAQ NTFEVPGYTL VDAMLSYDFG KANNGLQGLS AQLNVKNLTD KYYVAGCFAT
VACLLGTGRT VTADLTYRW
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