| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3255 |
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| Symbol | |
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| ID | 5871040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3652802 |
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| End bp | 3653671 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548371 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001669483 |
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| Protein GI | 167034252 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.992833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.261859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCC TCCCGAAACT GTTGCGCTGT GCCCGCCTTG CCCTGCTGCC ACTGCTGCTC
GCCCCCACCG TGCAAGCCCA GCAGGCGCTG ACCGTCGGCC TGATCCCGTC GGAAGACTCC
CAGGCCATGA TCAAGAGCAG CCAGCAAGTG CTCGACCAGT TGCAGGCGCG CCTGGGCATG
CCGGTCAAGC CGTACGTTGC CACCGACTAC AACGGGGTGA TCGAAGCCCT GCGCGCCGGC
AAGCTGGACG TCGCCTACCT CGGCCCGTTC TCCTATGTCC TTGCCAACCA GGTAGCAGGC
GCCGAAGCCT TTGCCGTGGC AGTGACCAGG AAGACCGCCA GCAGTGCCTA CCACAGCCTG
ATCATTGCCC GCCAAGACAG CGGCATCCGC ACGCTCGACG ACCTCAAGGG GCATACCTTT
GCCTTCGTCG ACCCCAGCTC TGCCTCCGGC CACCTGTTCC CCAAGGCCGG CCTGGAGCAC
GCCGGGCACG ACCCGAAAAC CCTGTTCTCG CGGGTGATCT TCTCGGGGTC GCACGACGCC
AGCATCCTCG CCGTGGAAAA CCGCAAGGTC GATGCCGCCG CCGTGGCCGA CCGCATCCTG
GCCGGCGCCG TGAACAGTGG CCAGGTCAAG CAGCAGGACT TCCAGGTGGT GTGGACCTCG
CCAGACATTC CCGAATCTCC GATGGTCTGG CGCAAGAACC TCGACCCCGA ACTGCAGGCC
AAACTGCGCG GTGCGTTTGC CGAGATCAAG GATGTACCGT GGGGTGACCA GGGCATGCTC
AATGGCTTCC AGCCAACCAC CGATGCTGCC TACAACGTGG TTCGCGACAC GGCCAAGGTG
CTCGACCTCG ACCTGCGGAG CCTGAAATGA
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| Protein sequence | MTPLPKLLRC ARLALLPLLL APTVQAQQAL TVGLIPSEDS QAMIKSSQQV LDQLQARLGM
PVKPYVATDY NGVIEALRAG KLDVAYLGPF SYVLANQVAG AEAFAVAVTR KTASSAYHSL
IIARQDSGIR TLDDLKGHTF AFVDPSSASG HLFPKAGLEH AGHDPKTLFS RVIFSGSHDA
SILAVENRKV DAAAVADRIL AGAVNSGQVK QQDFQVVWTS PDIPESPMVW RKNLDPELQA
KLRGAFAEIK DVPWGDQGML NGFQPTTDAA YNVVRDTAKV LDLDLRSLK
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