Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3210 |
Symbol | |
ID | 5870995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3594258 |
End bp | 3595394 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641548326 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001669438 |
Protein GI | 167034207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.2962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA TCGAAGTGGA TGCCATCATC GTCGGCGGCG GCATCGTCGG CAGCAGCGCC GCCTTGACCC TGGCCCGCAG TGGCCAGCAG GTGGCGCTGC TGGAGCGCGA CTTCTGTGGC TCGCATTCCA GCGGCGTGAA CTACGGCGGT GTACGCCGCC AGGGCCGTTC TTTGGCGCAA CTGCCGTTGT CGATGCGTGC CCACGCCATT TGGGGGCAAC TGCGCGAGTG GATCGGCATC GATGGCGAAT ACGCCCGCAG CGGCCACCTG AAGCTGGCAC GCAGCGAAAC CGACTTCGAC GCCTTGAAAG CCTATGCCCG GCGGACCCAG GCCTTTGACC TACGCCTGCA ACTGCTGGAG CGCCGCGAAC TGCGCCAGCG CTTCCCCTGG GTGGGCGATA TCGCCGTCGG CGCCTCGTAC TGCCCCGAGG ATGGCCACGC CAACCCTCGC CTGGTGTCAC CCGCGTTCGC CCAGGCCGCC CGGCACAGCG GCGCCCAGGT GCATGAGCAG TGCAAGGTGC TGGAAGTGGA CCACGACGGC CAGCGCTTCA CTGTGCGCAC CAGCTCAGGC CAGTGCTTCA AGGCGCCCTG GCTGCTGAAC TGCGCTGGCG CCTGGTCGGC GCAGTTGGCC GAGCAATACG GCGAGCCGGT GCCGCTGAGC GCAGCCCACC CGGCCATGCT GGTCACCGAG CCGCTCCCCC TGTTCATGAC CGCCAGCACC GGGGTCGAAG GCGGTGGCAT CTACGCCCGT CAGGTGGCAC GCGGCAACTG CGTGCTGGGC GGTGGCCGTG GCTTCGCCCT GACCGCGACC ACCGCGCGCC CTGGGCAAGC CGCCGTACTC GATATCCTGC GCAACGCCAC CGAGCTGTAC CCGGCATTGG CCGGCGCCCA GGCCATTCGC ACCTGGAGCG GCACCGAGGG CTACCTGCCC GATGACGAAC CGGTGCTCGG CCCGAGCCTG CTGCAACCTG GCCTGCTGCA TGGCTTCGGC TTTGCCGGCG CCGGCTTCCA GATTGGCCCG GCAGCTGGCG AGGCCCTGGC GCAATGCGTA CTCCATGGCG CGCCGGCAAT CAGCCTGGCA GCCTTTTCCA TCGACCGTTT TCAGCCCAAC CACCACTACA AGGAAAACCT GTCATGA
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Protein sequence | MTLIEVDAII VGGGIVGSSA ALTLARSGQQ VALLERDFCG SHSSGVNYGG VRRQGRSLAQ LPLSMRAHAI WGQLREWIGI DGEYARSGHL KLARSETDFD ALKAYARRTQ AFDLRLQLLE RRELRQRFPW VGDIAVGASY CPEDGHANPR LVSPAFAQAA RHSGAQVHEQ CKVLEVDHDG QRFTVRTSSG QCFKAPWLLN CAGAWSAQLA EQYGEPVPLS AAHPAMLVTE PLPLFMTAST GVEGGGIYAR QVARGNCVLG GGRGFALTAT TARPGQAAVL DILRNATELY PALAGAQAIR TWSGTEGYLP DDEPVLGPSL LQPGLLHGFG FAGAGFQIGP AAGEALAQCV LHGAPAISLA AFSIDRFQPN HHYKENLS
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