Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3078 |
Symbol | |
ID | 5870863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3443255 |
End bp | 3444538 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548194 |
Product | arsenical pump membrane protein |
Protein accession | YP_001669306 |
Protein GI | 167034075 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.144685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGTCG CCATTGCTGT CTTCGTCCTC ACCCTCACCC TCGTCATCTG GCAGCCAAAG GGGCTTGGCG TCGGCTGGAG TGCCGCGCTG GGTGCCGTCA TTGCCTTGCT GGCTGGCGCG GTTTCCCTGC ACGATATCCC CACCGTGTGG GCCATTGTCT GGAACGCTAC CGCCACCTTC ATCGCCGTCA TCATCATCAG CCTGCTGCTC GATGAAGCCG GCTTCTTCGA ATGGGCCGCG CTGCACGTTG CGCGCTGGGC AAACGGCAGC GGCTATCGCC TGTTCGCCTT CAGCGTGTTG CTCGGCGCCG CCGTGTCGGC GCTGTTTGCC AACGATGGCG CGGCGCTGAT TCTTACGCCA ATCGTCATGT CGATGCTGCT CGCATTGCGC TTCTCGCCTG CTGCGACACT GGCCTTTGTC ATGGCTGCGG GCTTTATTGC CGACACGGCG AGCCTGCCGC TGGTGGTCTC CAACCTGGTC AACATCGTCT CGGCCGATTA CTTCGGCCTG GGTTTCACCG AATATGCCTC GGTAATGGTG CCGGTGAATA TCGCCAGCGT GGCAGCCACC CTGGTGGTGC TTTATCTGTT TTTCCGCCGT GACATCCCAA GGCGGTATGC ACTCGATGCG CTGAAGAAAC CGAGCGAGGC GATTGTCGAC CGCGCCACCT TCAAAGTCGG AATGTGGGTA CTGGTGGCAC TGCTTACAGG CCTGTTTGCC TTGGAGCCGT TGGGTATCCC GATCAGTGCG GTGGCCGCAG CCTGTGCCGC CGCTCTGTTC GCCGTCGCTG CTTACGGTCA CCGTATTTCA ACGCGTCGCG TGCTGCGAGA GGCCCCGTGG CAGGTGGTGA TCTTCTCGCT CGGGATGTAT CTGGTGGTGT ATGGCCTGAA AAACGCCGGC CTCACCGACA TGCTCACTCA CCTGCTCGAC CGGCTTGCGC AACAAGGCCT ATGGAGTGCT GCCATCGGCA CCGGCCTTGT TTCGGCGCTG CTGTCCTCGG TGATGAACAA CATGCCCAGC GTTCTGGTCG GCGCCTTGTC GATCCAGGCC AGCGGCGCAG AGGGCCTGAT ACGTGAGGCG ATGATCTACG CCAACGTCAT CGGCTGCAAC CTCGGTCCGA AAATCACCCC GATAGGCAGC CTCGCCACGC TGCTTTGGCT GCATGTGCTG GAGCGCAAAG GCATGCGCAT CACCTGGGGT TACTACTTTG GTGTCGGCCT CCTGCTGACC CTGCCGGTTT TGCTGATCAC CCTCTCGGCC CTGGCACTGC GCCTGAGCCT CTGA
|
Protein sequence | MLVAIAVFVL TLTLVIWQPK GLGVGWSAAL GAVIALLAGA VSLHDIPTVW AIVWNATATF IAVIIISLLL DEAGFFEWAA LHVARWANGS GYRLFAFSVL LGAAVSALFA NDGAALILTP IVMSMLLALR FSPAATLAFV MAAGFIADTA SLPLVVSNLV NIVSADYFGL GFTEYASVMV PVNIASVAAT LVVLYLFFRR DIPRRYALDA LKKPSEAIVD RATFKVGMWV LVALLTGLFA LEPLGIPISA VAAACAAALF AVAAYGHRIS TRRVLREAPW QVVIFSLGMY LVVYGLKNAG LTDMLTHLLD RLAQQGLWSA AIGTGLVSAL LSSVMNNMPS VLVGALSIQA SGAEGLIREA MIYANVIGCN LGPKITPIGS LATLLWLHVL ERKGMRITWG YYFGVGLLLT LPVLLITLSA LALRLSL
|
| |