Gene PputGB1_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3055 
Symbol 
ID5870840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3411041 
End bp3412015 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID641548171 
Productvon Willebrand factor type A 
Protein accessionYP_001669283 
Protein GI167034052 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGCT TTGACTACCC GTGGGTGTTC CTGCTGTTGC CGCTGGCGTG GTTGGCCTAT 
CGTGCGCTCA GCCCGTACCA GGAAGGCCGT AGCGCGTTGC GGGTACCCTT CTTCGCAGCC
ATGAGCCGCG CTGTCGGCAA GCAGCCCGGG AGGGCCAGCA GCGGGCAAGG GCATGTACTG
CTGAACCTGC TGGTGTGGTG CCTGTTGGTG GCCGCTTGCG CAAGGCCTGT GCTGGTGGAA
AAGCCGATCC AGCGCGAGCA GCCAATCCGT GACCTGATGC TGGCCATCGA CATTTCCCAG
TCGATGGAAG CGACCGATTA TACCGACGCC AATGGCGCTA AAAGCGACCG CCTTAGCGCG
GTGAAGTCCG TGGTGCGCGA CTTCATCGCC CGGCGCAAGG ATGACCGCAT TGGCCTGATC
GTGTTTGGTA CCGGTGCCTA TCCGCAGGCG CCGTTGACCC TCGACCATGC CAGCCTGTTG
CTGTTGCTCG ATGAGGTGGG GATCGGCATG GCTGGGCCAA ACACCGCGCT GGGCGACGCC
ATCGGCTTGA CCATCAAAGC CTTGGAGAAG ACCCCAGAGC AGGAGAAAGT GCTGATCCTG
CTGACCGATG GCAATGACAC CAGCAGTGCC ATTACCCCTG ACCATGCGGC CCACCTGGCC
CAGGCCAACG GTATCGTGGT ACATACCATT GGTATCGGCG ACCCGCAGGC GACTGGTGAC
GCCAAGGTCG ACCTGACGAC CTTGCAGGCA ATCGCCCGCA CCACCGGCGG GCAATTCTTC
CGCGCCGACG ACCGCCAGGC GCTGCAACAG GTGTATGCCA CCCTCGACCG CCTGACCCCG
CACAAGGTGC AGACCTTCAG CCACCAGCCC AAGCGTGACT TGTTCGTCTG GCCATTGGGT
ATGGCAGCCG GTTTGCTACT GGCGGGGCAA CTGCTGGCCC TGGTCCGGGC ACGGCTTGCG
CAGGTGCAGG CATGA
 
Protein sequence
MWRFDYPWVF LLLPLAWLAY RALSPYQEGR SALRVPFFAA MSRAVGKQPG RASSGQGHVL 
LNLLVWCLLV AACARPVLVE KPIQREQPIR DLMLAIDISQ SMEATDYTDA NGAKSDRLSA
VKSVVRDFIA RRKDDRIGLI VFGTGAYPQA PLTLDHASLL LLLDEVGIGM AGPNTALGDA
IGLTIKALEK TPEQEKVLIL LTDGNDTSSA ITPDHAAHLA QANGIVVHTI GIGDPQATGD
AKVDLTTLQA IARTTGGQFF RADDRQALQQ VYATLDRLTP HKVQTFSHQP KRDLFVWPLG
MAAGLLLAGQ LLALVRARLA QVQA