| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3022 |
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| Symbol | |
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| ID | 5870807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3369962 |
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| End bp | 3370909 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548138 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001669250 |
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| Protein GI | 167034019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.680601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA AAACAACAGT GCCCGTGCTT GCCGCATCGC TGCTCGTCGC GTCCATCGCC
ACCGCCCAGG CCAGTGACCC CGCTGCCTGC CAGACAGTCA ACTTCGCGGA GGTCGGCTGG
GCTGACATCG CCGCCACCAC TGGGCTCGCG ACTACCGTCT TGCAAGGCCT GGGTTACAAG
ACCAAGACCC AGATGCTGTC GATCCCGATG GCGTACCAGG CCATGGAAAT GAAGAGCATC
GACGTCTACC TTGGCGCCTG GATGCCGTCG ATGGCGGCAA TTTCCACGCC TTTTCTGGAA
AAAGGCAGCG TCGAGCGGGT ACGCACCAAC CTGACCGGTG CCAAATACAC CCTGGCCGTG
CCGGACTATG CCTACGAGGC CGGGCTCAAG CGCTTCGAGG ACATCGCCCG GTTCAAGGAC
GAGTTGCAAG GGCGCATCTA CGGCATCGAG GCCGGCAATG ATGGCAACCA GATCATCCAG
GGCCTGATCG ACAAGGACAG CTATGGCCTC AAGGGTTTCC GCCTGGTCGA CTCAAGCGAG
GCCGGCATGT TGGTGGAAGT ACGCCGGGCG GTGCGCTCGA AAAAGCCGAT CGTGTTCCTG
GGGTGGGAGC CGCACCCGAT GAACAGCCAG CTGTCGATGC GTTATCTGAG TGGTGGCGAC
GCTGAGTTCG GCCCGAACTA CGGGGCTGCA GTGGTCGACA CCCATACGCG CAAAGGCTTC
GGCCAGGAAT GCCCGAACGT AGGTGCGTTA TTGTCTCGGA TGGCGTTTGA GCTGGGGATG
GAAAGCCAGA TCATGGGGGC CATTCTCAAC GACAAACAAA AGCCTGCGCT GGCATCACGG
GAGTGGCTCA AGCGCAACCC ACAGGTGCTG GAGAACTGGC TGGCGGGGGT GACGACGTTC
GATGGCCAGC CAGGGGCATC GGCGGTGCGC AGTTACCTTG GGCTTTAA
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| Protein sequence | MPKKTTVPVL AASLLVASIA TAQASDPAAC QTVNFAEVGW ADIAATTGLA TTVLQGLGYK
TKTQMLSIPM AYQAMEMKSI DVYLGAWMPS MAAISTPFLE KGSVERVRTN LTGAKYTLAV
PDYAYEAGLK RFEDIARFKD ELQGRIYGIE AGNDGNQIIQ GLIDKDSYGL KGFRLVDSSE
AGMLVEVRRA VRSKKPIVFL GWEPHPMNSQ LSMRYLSGGD AEFGPNYGAA VVDTHTRKGF
GQECPNVGAL LSRMAFELGM ESQIMGAILN DKQKPALASR EWLKRNPQVL ENWLAGVTTF
DGQPGASAVR SYLGL
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