Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3021 |
Symbol | |
ID | 5870806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3368805 |
End bp | 3369890 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548137 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001669249 |
Protein GI | 167034018 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.826436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCGG CGCCCATTGC CGAGCCTGGT GCAACCATGA AACGATCCGA AACCCTTGAC CTTCAGTGGC AGGGCCCTGC CAGCCCTCCG CTGCGCATCG GCATTCTGTT GCTGCCATCG TTTTCCAACT TCGGCCTGGC CTCGCTGATC GAACCGCTCT CGATCGCCAA CTGGCTGGCC CAGTGCAACC TGTTCCAATG GACCCTGCTC TCGGTAGACG GCCAGCCGGT GCCCGCCAGC AACGGCCTGC TCGCCGGTGC CCAGGCGGGC ATCGGCGAGC ACAGCGAATT CGATGCCTGC GTGGTGATCG CCAGCTTCGA TGTGCACCGC CACGCGCGCA ACCCGGCCCT CAAGGCCTGG ATCAAGCGCC AGGCGGCCTT CGGCGCAGTC ATGGTAGGGA TCGAAACCGG CACCGAGCTG CTGGCTGCGG CAGGTGTGCT CGACGGCCAC CCGGCCGCCG TCCATTGGGA CAACCTGCAA GGTTTCCAGG AAAGCTACCC TAGGGTGCAA GCCTGCGCGC AGCTCTACTC GTTGGGCCGC AAGCGCCTGA CCTGCGCAGG CGCCACTGCC GTGCTGGACA TGGTGCTCAG CTGGCTGGAC CGGCTGGCCG GTGGCAACCT GGCACGCGAA GTGGCCATGC ACATGCTCAT CGAGCAGGTA CGCGAGCCGC AGGTCCAGCA AGCCGAAGGC TATCGCCGCA ACCTGCATGC CCAGGCCGGC AAGATGGGGC GGGCCATCGA GTTGATGGAA CAGCACCTGG AAGAACCGCT GAGCTGCGAG GCCATCGCCG AGCGTGTGGC ACTGTCGCGT CGCCAACTGG AGCGCCAGTT CATGCAGCAC ACCGGCCTTA CGCCGCTGAA GTACTACCTC AGCCTGCGCC TGGCGCGCGC CCACAACCTG TTGCAGCAAA CCCGCATGAG CGTTGCCCAG GTTGCAGCCA GTGCAGGTTT CGGCTCGCTG GAACACTTCT CCCGCGCCTA CCGCGCCAAA TTCGGCTGTG CACCGAGCAA CGACCGTTCG CAGAGTTTGA GCGCCCCGGT CATGCGCCAG CCGTTGGGGC ATGACCGGCA GCCGTTGGCG ATCTGA
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Protein sequence | MQPAPIAEPG ATMKRSETLD LQWQGPASPP LRIGILLLPS FSNFGLASLI EPLSIANWLA QCNLFQWTLL SVDGQPVPAS NGLLAGAQAG IGEHSEFDAC VVIASFDVHR HARNPALKAW IKRQAAFGAV MVGIETGTEL LAAAGVLDGH PAAVHWDNLQ GFQESYPRVQ ACAQLYSLGR KRLTCAGATA VLDMVLSWLD RLAGGNLARE VAMHMLIEQV REPQVQQAEG YRRNLHAQAG KMGRAIELME QHLEEPLSCE AIAERVALSR RQLERQFMQH TGLTPLKYYL SLRLARAHNL LQQTRMSVAQ VAASAGFGSL EHFSRAYRAK FGCAPSNDRS QSLSAPVMRQ PLGHDRQPLA I
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