| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3018 |
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| Symbol | |
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| ID | 5870803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3361185 |
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| End bp | 3365300 |
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| Gene Length | 4116 bp |
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| Protein Length | 1371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548134 |
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| Product | signal transduction histidine kinase with CheB and CheR activity |
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| Protein accession | YP_001669246 |
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| Protein GI | 167034015 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.980757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGT CCAGCAAGAC TTCCCTCGCC TCGCCGCACA ACCCTTCGCT CAGCCCCAGC
CATCTGGACT TTCCAGTGGT GGGCATCGGG GCATCGGCCG GCGGGCTGGA GGCGGTGCAG
GCGTTTTTCC AGCACGCCCC CGAAAACTGC GGCATGGCGT TCGTCGTGGT GCTGCACTTG
TCGCCGGACC ACCAGAGCCA GGCCGATCGC TTGATCCAGC GCGTCACGCG CATGCCGGTG
TGCCAGGTAA GCGAGCCAGT ACCGATCGAG CGTGACCACG TTTATGTCAT TTCGCCGGCC
AACCGCCTGT CCACCAATGA CGGTTACCTG CGGGTCAGTC CGGCCAGACG CAGCCGCGGC
GACCACGTCG CCATCGACCT GTTCTTCCGC GACCTTGCTG ATGTGCACAA GGACCATGCG
TTCTGCGTGA TCCTTTCGGG CAGCGGTAGC GATGGCGCAG TGGGCCTGTC GCGCATCAAG
GAACAAGGTG GCGTGACCCT CGTGCAGTCG CCCGATGACG CCCAGTACCC CGACATGCCC
AAGGCTGCCA TCGCCACTGG CATGGTCGAC CTGATCCTGC CGGTAACCGA GATCCCGGGC
AAGCTGTTGG AACTGTGGCG CTCGGCACAG AAGGTGAAAC TTCCGGAAAT AGAGGATGAC
AGCCTGCCCC CGCCTCTGGG CGAACGTTCA GGCGACCCAG CCCAATCCGA CCCGCTGCTC
GACGACATCC TCACCCGCCT GCATGCCGGT ACCGGCCACG ATTTCCAGCA CTACAAGCGC
GCGACGATCC TGCGCCGACT TGAACGGCGC CTGCATGTCA CCGCACAGAC CGACCTGGCC
GGTTACCGCG ATTACCTTGA GCGGCATCCT GAGGAATGCC GTGCATTGCT GGCTGACATG
TTGATAGGGG TCACCAATTT CTTCCGGGAC CGCGAAGCCT TCGAAGCATT GCAGCAGCAT
GTGATGCCGG GCCTTGCCAT TGACGACAGC GAAGATCTTC AGCGCGAAGT GCGCATCTGG
TCGGCAGGTT GTTCATCCGG CGAGGAAGCC TACAGCCTGG CGATGATGGC GACCGAACAA
TTGGCAATGG AGCAGCGCAG TGCCAAAGTC CAAGTGTTCG CCACAGACCT CGACGAACGC
GCGATCAATG TCGGCCGGCT AGGCGTCTAT CCCGATGCCA TCGCCACCGA TGTGCCCACG
GCCAGGTTGC GTCAGTTTTT CATCAAGGAA GACCAGCATT ACCGGGTACG CAAGGACATT
CGCGAAAAAG TCCTGTTCGC CCGACATAAC CTGTTGTCCG ATCCTCCGTT CTCACAGTTG
GACCTGGTGG TCTGCCGTAA TCTGCTCATC TACCTGGATC GGGAAGTGCA ACGGGAAATA
TTGCGCCTGT TCCACTTCGC CCTGCGCAAA GGGGGTTATT TGTTCCTGGG CAGTTCGGAA
TCGGCGGACG TGGCTGCCGA CCTGTTTATT GCCGTAGACA AGCACCATCG CATCTTCCGG
GCTCGGGAAG TGGAGCCGGC GCGCCGCCCG GGGCGGCTTC ATACGCCCGA CACGCAAGCC
ATACGCGCCA AACCCAAACC CAAACCCCTG CGCAAGCTGT CCTATGCTGA AATCCATCAC
CGTGCATTGT CCAGACGCAC ACCGCCCAGC CTGATCGTCG ATGGTGATGG CAACATTTTG
CACATGAGTG ATGGCGTCGG CCGATTCCTA CGCCACGCCG GTGGCGAAGT CAGCCCCAGC
CTGCTGAACC TGGTACTCAC ACCGCTGCGC CCTGCCCTGC GCAGTAGCTT GTTGCAGGCT
CATAACACCG GCCAGCCGGT CAGCTCGGGC GCCGTGATCA CCACCATCGA CGATCAACGC
GTCGAAATCC AGGTACAGGT TCAGCCCCAC CAGGACGAAC CCAGTGGCAG CGAATGCCTG
CTGGTGGTTT TTCAGGTTCG CGAAGCTGAT CCCCATAGCC CGCCTGCTAT CCAGCAAACC
GAAGGCATGG TGTTGAACAC CCTGGAGCGC GAACTGCAGC GCACCCGTCA GCAGTTGCAG
GAAACCATCG AGCAGTCGGA CATCTCCAGC CAGGAGCTGA TGGCCTCGAA CGAAGAAATG
CAGGCGATCA ACGAGGAGCT GCGCCTGGCC AGCGAAGAGC TGGAAACCAG CAAGGAAGAG
CTTCAGTCAA TCAACGAAGA ACTGCTGACA GTCAATTACG AGCTCAAGAC CAAGGTCGAT
GAAACCGACA AGGTCAACGA TTACCTGAGC AACCTGATCG CCTCCACCCA GATCGCCACC
GTGTTCGTCG ACCGCAACTT GCACATTCGC TGGTTCACCC CCGGGGCCAC CGCCATTTTC
AGCATACTGC CGGTCGACAC CGGCCGCTCG CTGCTCGACA TCACCCATCG TCTGGAATAC
CCAGGCCTGG CAGACGATGC ACGCGCCGTG ATCGAACGCG AAACCACGAT CGAGCGTGAA
GTGATCGGCC AGGACCAGCA TTGGTACCTC GCGCGCCTGC TACCGTACCG GGCCAGTGAG
CAGAACGTCG ACGGTACGGT GCTGACGTTC ATCGACATTA CCGAGAGTCG TGCGGCCGAG
GAACGCTTGC GCCAAGGTGA AGAGCGCATG CGCCTGGTCG CAGAGAGCAC CCATGATTTC
GCCATCATCC TGCTTGACGA ACAAGGCCTG ATCATCGACT GGAACACGGG CGCTGCGCTG
ATTTTCGGCT ACGCCAAGGA TGAAGTGCTG GGCCTTCACT ATGCGCTGAT TTTCACCGAG
CAGGATCGCG AAAACGGCGA GCCGGAACGC GAATTGCGCG CTGCCCGCCA GCATGGCCGC
GGCCAAGACG AACGCTGGCA TGTGCGCAAG GACGGCAGCC GCTTCTATTG CAGTGGCGAA
GTCTCGCGTC TCAAGGGCAG CAGCTTGCGC GGTTACGTGA AAATCGCCCG TGACCTGACC
GGCCACAAGC GCTTGCAGGA CGAACAAAGC AAGCGTCTGG CCGAGTCGCA AAGCTCCAGC
CATATGAAGG ACGAGTTCTT CGCGGTGATG TCCCATGAGC TCAAGCACCC GCTGAACCTG
ATCCAGCTCA ATGCCGATAT TTTGCGACGC ATACCATCGG TCACAAGCAC CGGCATGGCG
AGCAAAGCGG TCAACGTCAT TCGCGAAGCA GTCACCAGCC AGGCACGCAT CATTGATGAC
TTGCTTGATG TTGCGCGCAT CCGCACGGGC AAGCTCAAGC TGAAGACCCA ACCCGTCGAT
TTGTGTGCCG TGCTGCAAGG TATCTGCGCT GTAGCCTGCA ATGAGCAGCG CGGACGCAGT
GTTCGGCTGA CGCTGCCGGC CGATGGCGAG CCGGTCTTGG TGGAGGCCGA CAGCACACGT
GTCGAGCAGA TCATCTGGAA CCTGTTGAAC AACGCACTGA AGTTCAGCCC CGCCGATGGC
GATATTCTGT TGAGACTTAC TCGGCAGGAT GAGCAGGCAC GACTTGAAGT CATTGATCAG
GGCATAGGCC TCGCCGAAGA CTCCCTGGAA GGCATTTTTG AGTTGTTCAA CCAGGCTACA
CCCACCGGCC ATGGGCGTGA GGGGCTGGGT ATTGGCCTTT CCCTGGTCCG TCAACTGGTA
GAAGCCCACG GCGGAGCGGT CAGCGTAGAG TCTCCCGGAG TAGGCCAGGG TTGTACTTTC
GTCATCACAT TGCCTTTGTG CGTGTACACA CAGCAACCCC AGGTTCAGGG CGAAGCGCTG
CCATCAGAAG GTCGGCTGAC AGGGGTTCGC ATACTGCTGG TGGATGACTC GCTCGACGTG
CTGGAAGTGA TGGAACAATT GCTGTTGATG GAGGATGCCG ACGTCGACGC CTACAGCGAC
CCGAAACTGG CGCTGCAATC GGCAGCAGAT GCGCGTTACG ACGTGATCAT TTCCGACATC
GGCATGCCTG GCATGGATGG CCATGCACTG ATCCGGGCGC TACGTGGCCT GGAACATCTG
CGCTACATCC CTGCCATCGC TTTGACTGGC TATGGGGCAA GCGCTGACCA ACACAAGTCT
CGCCAGTCCG GTTTTGACCG TCACTTAAAC AAGCCCGTGG GTTATGACGA CCTGATTGAC
GCGATCGAGC GCCTGAATGG CTCAGCGTCG GTCTGA
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| Protein sequence | MKSSSKTSLA SPHNPSLSPS HLDFPVVGIG ASAGGLEAVQ AFFQHAPENC GMAFVVVLHL
SPDHQSQADR LIQRVTRMPV CQVSEPVPIE RDHVYVISPA NRLSTNDGYL RVSPARRSRG
DHVAIDLFFR DLADVHKDHA FCVILSGSGS DGAVGLSRIK EQGGVTLVQS PDDAQYPDMP
KAAIATGMVD LILPVTEIPG KLLELWRSAQ KVKLPEIEDD SLPPPLGERS GDPAQSDPLL
DDILTRLHAG TGHDFQHYKR ATILRRLERR LHVTAQTDLA GYRDYLERHP EECRALLADM
LIGVTNFFRD REAFEALQQH VMPGLAIDDS EDLQREVRIW SAGCSSGEEA YSLAMMATEQ
LAMEQRSAKV QVFATDLDER AINVGRLGVY PDAIATDVPT ARLRQFFIKE DQHYRVRKDI
REKVLFARHN LLSDPPFSQL DLVVCRNLLI YLDREVQREI LRLFHFALRK GGYLFLGSSE
SADVAADLFI AVDKHHRIFR AREVEPARRP GRLHTPDTQA IRAKPKPKPL RKLSYAEIHH
RALSRRTPPS LIVDGDGNIL HMSDGVGRFL RHAGGEVSPS LLNLVLTPLR PALRSSLLQA
HNTGQPVSSG AVITTIDDQR VEIQVQVQPH QDEPSGSECL LVVFQVREAD PHSPPAIQQT
EGMVLNTLER ELQRTRQQLQ ETIEQSDISS QELMASNEEM QAINEELRLA SEELETSKEE
LQSINEELLT VNYELKTKVD ETDKVNDYLS NLIASTQIAT VFVDRNLHIR WFTPGATAIF
SILPVDTGRS LLDITHRLEY PGLADDARAV IERETTIERE VIGQDQHWYL ARLLPYRASE
QNVDGTVLTF IDITESRAAE ERLRQGEERM RLVAESTHDF AIILLDEQGL IIDWNTGAAL
IFGYAKDEVL GLHYALIFTE QDRENGEPER ELRAARQHGR GQDERWHVRK DGSRFYCSGE
VSRLKGSSLR GYVKIARDLT GHKRLQDEQS KRLAESQSSS HMKDEFFAVM SHELKHPLNL
IQLNADILRR IPSVTSTGMA SKAVNVIREA VTSQARIIDD LLDVARIRTG KLKLKTQPVD
LCAVLQGICA VACNEQRGRS VRLTLPADGE PVLVEADSTR VEQIIWNLLN NALKFSPADG
DILLRLTRQD EQARLEVIDQ GIGLAEDSLE GIFELFNQAT PTGHGREGLG IGLSLVRQLV
EAHGGAVSVE SPGVGQGCTF VITLPLCVYT QQPQVQGEAL PSEGRLTGVR ILLVDDSLDV
LEVMEQLLLM EDADVDAYSD PKLALQSAAD ARYDVIISDI GMPGMDGHAL IRALRGLEHL
RYIPAIALTG YGASADQHKS RQSGFDRHLN KPVGYDDLID AIERLNGSAS V
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