Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2988 |
Symbol | |
ID | 5870773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3338758 |
End bp | 3339900 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641548104 |
Product | histidine kinase |
Protein accession | YP_001669216 |
Protein GI | 167033985 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.539821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.386359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGT ATGATTTCAT CGAAAGTGAC ATGGAGTCCA TCCTTCAGGC TTGGGAAAAT TTTGCCCGCT CTGTTGAAAC AGTGCTGCCG CCTCAGGATT CTGCGGGCTT GAGGAATCAT TCCGAGAAAA TCTTGCGGAC GGTAGCCGCC GACATGCGAA CCGCCCAGAC TCAACACCAA CAGTCTGAGA AGGCTCAGGG AAGGGGGCCT CGGAAGTCCA GCAAAACCGC TGCCCAGACC CATGCGGTCA CTCGTCTGAT TGCCGGCTTT TCGATGGATC AAATGGTGTC TGAGTACCGA GCTTTGCGTT CCAGTGTGCT TTCCCGCTGG CTTGCTCAGG AGGGTCTTCG CGAAACATTC CACATTCAAG ACATGATTCG GTTTAACGAG GCCATCGACC AAGCATTGGT AGAGTCGATT GCCGCTTACG GGCAGGCAGT GGAGTCGACC CGGAAAATGG TGCTGGGCGT GCTGGGCCAC GACCTACGAT CCCCTCTCGG CGCGGTGCTG ATGGCCGGGG ATCTGATCCT ACGTCAGGAT GGGTTGGATG AAAAAACCAG AGTGTATGCT TCTCAAGTCC ACACCAGCGC CAAGCGCTGC AGCCACATGG TGGATGATCT GCTCGATTTG GCACGCTGTA ATCTGGGGAC TGGCATTCCA ATACATCCGG AAATGGCCGA GTTGAATCCG ATCTGCCGAT CAGTCATCGA AGAGCTTCGA ACAGCGTTCC CCGATAACTT GATCCATTTC AATGAAACAA TGACGATCAG TGGGCTGTTC GATACCGCTC GGATTGCTCA GGTATTCTCC AACCTGGTCA CCAACGCTAT CCGCCATGGC GATGCAAGCT CTCCGATCAG TGTGACCATC AAAGAAGAGG GTGCAGAGTC ACACGTCTGT GTGCACAATC GAGGCGAACC TATTCCACCT GAAGCGATGC CCTATCTTTT CAAGCCAGAA GGGCGGTACT CCAGCTACGC GGCTAAAGAA AAAGGCGCAT CAGCAGGATT AGGGCTTGGG CTGTTCATCG CTGCAGAGAT CGTTGGCAGT CACGGTGGCA GAATTGAGGT CGAATCTTCC GCCGAGGAGG GAACGACGTT CGACGTCATT CTCACGCGCT CCCCCCAGGC TGGGGGCGTT TAA
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Protein sequence | MRLYDFIESD MESILQAWEN FARSVETVLP PQDSAGLRNH SEKILRTVAA DMRTAQTQHQ QSEKAQGRGP RKSSKTAAQT HAVTRLIAGF SMDQMVSEYR ALRSSVLSRW LAQEGLRETF HIQDMIRFNE AIDQALVESI AAYGQAVEST RKMVLGVLGH DLRSPLGAVL MAGDLILRQD GLDEKTRVYA SQVHTSAKRC SHMVDDLLDL ARCNLGTGIP IHPEMAELNP ICRSVIEELR TAFPDNLIHF NETMTISGLF DTARIAQVFS NLVTNAIRHG DASSPISVTI KEEGAESHVC VHNRGEPIPP EAMPYLFKPE GRYSSYAAKE KGASAGLGLG LFIAAEIVGS HGGRIEVESS AEEGTTFDVI LTRSPQAGGV
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