| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2979 |
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| Symbol | |
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| ID | 5870764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3329835 |
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| End bp | 3331043 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641548095 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669207 |
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| Protein GI | 167033976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.504162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.470483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTTG ATATTGGTAC ATCGAGAACC GCCATGAGCA GCCCAGCAAT CCCCCTTCAA
TATTCAAGCC GTCATGTCTG GAGTGCTGTC CTTGCGATGT CGCTCTGTGC CTTCGCCCTG
GTGGCCTCAG AGTTTCTGCC GGTGAGCTTG CTCACTCCGA TTGCGTCCGA TTTGTCACTT
ACTGAAGGGC AAGCTGGGCA GGCCATCTCA ATCTCGGGTT TCTTCGCTGT GATCACCAGT
CTGTTGCTGG TCACCTTGAC CCAGGGAATC GACCGCAAGC CTGTCCTGCT GACCACAACG
GCGCTCATGC TTGTTTCCGG TGCGATGGTG GCGTTTGCTC CAAACTACCT GACATTGATG
GTAGGGCGCG CCGTGCTTGG GATTGCCATT GGCGGATACT GGTCGATGTC CACTGCAGTG
ATGATGCGCA TCGCACCTGG GGCGCTTGTG CCCAAGGCCA TTGCCGTCAT GCAAGGTGGT
ACCGCTTTGG CCACGGCAAT CGCGGCGCCA ATTGGGAGCT ACCTGGGGGG CATGATTGGC
TGGAGAGGGG CATTCTTTTG TGTCGTGCCC TTGGCCGCAT TGGCGTTGAT CTGGCAAGCT
TTCACACTGC CTCGGATGCC GAGTGAGCGG ACTAAATTAT CGGTCACAGG CTCACTGCGT
TTGCTGGGAG ACAGCAAAAT AGCCATCGGC ATGGCCGCAG TAGCTTTCCT CTTCATGGGA
CAGTTCACGC TGTTCACTTA TCTGCGACCT TTCCTGGAAA CGGTCACGCA TGTCGATGTG
CCGACGCTTT CGCTCCTGCT ATTGATCATT GGTGCTGCAG GTTTGCTGGG CACCCTGTTG
GTCGGCCCTC TTGTTAGCAG AACCCTGAAC AGGGTTCTGG TGGGAATACC GATAATCATG
TCGGCCATCG CGTTCGCCGC TATTGCGGTG GGTAGCTCGG TAATACCACT CGCGGTTTTG
CTCGGCCTCT GGGGATTGAT CGCAACATGT GCGCCCGTGG GGTGGTTCAC CTGGTTGGCC
AAAGCGCTGC CGCACAATGC AGAAGCCGGT GGTGGGCTGA TGGTGGCGGT GATTCAATTA
GCCATCACCG CAGGCGCCAC AGTAGGCGGT TTGCTCTACG ACGGGATTGG CTACCAGGCT
GCATTCATTG CCAGTGGGAC GTTCCTGTTC ATTGCAACGC TACTGAGTGT GATCACGAGT
CAGAAATAG
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| Protein sequence | MSFDIGTSRT AMSSPAIPLQ YSSRHVWSAV LAMSLCAFAL VASEFLPVSL LTPIASDLSL
TEGQAGQAIS ISGFFAVITS LLLVTLTQGI DRKPVLLTTT ALMLVSGAMV AFAPNYLTLM
VGRAVLGIAI GGYWSMSTAV MMRIAPGALV PKAIAVMQGG TALATAIAAP IGSYLGGMIG
WRGAFFCVVP LAALALIWQA FTLPRMPSER TKLSVTGSLR LLGDSKIAIG MAAVAFLFMG
QFTLFTYLRP FLETVTHVDV PTLSLLLLII GAAGLLGTLL VGPLVSRTLN RVLVGIPIIM
SAIAFAAIAV GSSVIPLAVL LGLWGLIATC APVGWFTWLA KALPHNAEAG GGLMVAVIQL
AITAGATVGG LLYDGIGYQA AFIASGTFLF IATLLSVITS QK
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