| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2947 |
|---|
| Symbol | |
|---|
| ID | 5870732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3297982 |
|---|
| End bp | 3299040 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641548063 |
|---|
| Product | malate/L-lactate dehydrogenase |
|---|
| Protein accession | YP_001669175 |
|---|
| Protein GI | 167033944 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.353737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA ACACGCAGTA CGACGCGCAA GCACTGACCA CGTTTGTCGA GCGACTGTTC
ACCAAAGCCG GTGCCGATGC CGATGTCGCC CAGGCGGTGA CCCGGGTGCT GCTCGAAGGC
GAATTGCTCG GCCATCGTAC CCATGGCCTG AACCTGGTCA GCCGCTACAT CGACGGTATG
CTCAGCGGGC ACGTCAAGGC CCGCGCGCAG GCGCTGGAAC AGGTCGCGGA CAGTGGCATT
TCCAGCTTGT TCGACGGCCA TTATGTGTTG GGGCCGTATT GCGTCAGCCG GGCCCTGGAC
TGTGCGGCCA AGGGCGCGAC CGCACAGGGC ATCGGTATTG CAGTGGTGCG CCGTGCGGCG
CATATCGGCT GCCTGGCTGC CTACCTCAAG CCCTACACCG ACCAGGGCTT GGTGGCCATG
GTTTACTCTT CGGACCCTTC GTTGGGGCTG GTTTGCGCCC ATGGCGGCAT TGACCCGGTG
TACACCCCCA ACCCGATTGC TGCCGGTATC CCGACCCAGG GCGAACCGAT TCTGCTCGAT
GTCAGCATGT CCACCGTCAC CCTCGGCCTG GTCGGCCAAT GCCGCGATGC CGGCAGCCGC
CTGCCGCACC CGGTAGTGGT GAGCAATGAC GGGCAACTGA GCGACGACCC AGGTGATTTC
TTCACTCGCC CGCAAGGCAG CATCCTGCCC TTGGGTGGCC AGGCCTTTGG CCACAAAGGC
TTCGCCCTGG CGCTGCTGGT TGAAGCCCTG ACGTCGGGCT TGGGCGGCCA CGGGCGCAAG
GATGCACCAG AGCAGTGGGG TGCCTCGGCT ACTGCCGTGG TCATCGACCC GCGCTTCTTT
GGCGGCCTGG AAGCGTTCAC CGATGAAACC AGCTTCCTGG GCCGACTGGT ACTTGCCAGC
CGCCCGCTCG ACCCCGAGCG CCCGGTGCGT TTGCCTGGGC AAGCTGGCCT TGCCCTGCGT
CGCCAGGCCC TGGAGCAGGG CGTGAATCTT TCGCCTCAGG TGGTGGCCGA CCTTGACCGC
CTGGCCGGGC AGTTGCAACT GCCGGCACTT TCCCATTGA
|
|---|
| Protein sequence | MTQNTQYDAQ ALTTFVERLF TKAGADADVA QAVTRVLLEG ELLGHRTHGL NLVSRYIDGM
LSGHVKARAQ ALEQVADSGI SSLFDGHYVL GPYCVSRALD CAAKGATAQG IGIAVVRRAA
HIGCLAAYLK PYTDQGLVAM VYSSDPSLGL VCAHGGIDPV YTPNPIAAGI PTQGEPILLD
VSMSTVTLGL VGQCRDAGSR LPHPVVVSND GQLSDDPGDF FTRPQGSILP LGGQAFGHKG
FALALLVEAL TSGLGGHGRK DAPEQWGASA TAVVIDPRFF GGLEAFTDET SFLGRLVLAS
RPLDPERPVR LPGQAGLALR RQALEQGVNL SPQVVADLDR LAGQLQLPAL SH
|
|---|
| |