Gene PputGB1_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2930 
Symbol 
ID5870716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3281115 
End bp3281843 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID641548048 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_001669160 
Protein GI167033929 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0915809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTA GCGACAGCAG GCACCCGGTG GTTTCTCGCA GCCAGTGGCT GGCAGCTCGC 
CGGCAACTCT GGCTGCACGA AAAAGCCTTT ACCCACCACC GCGACGCGCT GGCCGCAGCC
CGTCGCGCCC TACCTTGGGT CAAAGTCGAA CACGACTATC GTTTCAACGG GCCGGACGGC
GAGTTGAGCC TGGCCGACCT GTTCGCGGGT CGCAGCCAAT TGCTGCTTTA CCATTTCATG
TTCGCCGAGG GCTGGAGCGA GGGCTGCCCC GGTTGCTCGT TCCTGGCTGA CCATTTTGAC
GGTGCCAACT TGCACCTTGC ACACCACGAC GTGTCCCTGG TTGCGGTATC GCGGGCACCG
TATGCCGAGT TCCAGGCGTT CCGTCGACGC ATGGGCTGGC AGTTCCCGTG GTACTCGTCA
CACGGCAGCG GTTTCAACGA AGACTTTGGC GTAAGTGTCG GCAACGAGGG TGAACGGCAG
TACAACTATG AGCCGTATAA CGGCAGTGAA AGCGAGCTGC CTGGCTTGAG TGCGTTCTAC
CGCGAAGCGG ACGGCAGCGT GTACCACACC TACTCAACCT ACGCCCGCGG GCTGGACATC
CTGGTCAATA CCTACAACTT CCTCGACATT GCGCCACTGG GACGCAATGA AGGCGGGACC
ATGGACTGGG TGCGGCACCA TGACCGCTAT GAAGGGCAGC CAGACAAGGC ACACTGCTGT
CACAACTGA
 
Protein sequence
MSTSDSRHPV VSRSQWLAAR RQLWLHEKAF THHRDALAAA RRALPWVKVE HDYRFNGPDG 
ELSLADLFAG RSQLLLYHFM FAEGWSEGCP GCSFLADHFD GANLHLAHHD VSLVAVSRAP
YAEFQAFRRR MGWQFPWYSS HGSGFNEDFG VSVGNEGERQ YNYEPYNGSE SELPGLSAFY
READGSVYHT YSTYARGLDI LVNTYNFLDI APLGRNEGGT MDWVRHHDRY EGQPDKAHCC
HN