Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2930 |
Symbol | |
ID | 5870716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3281115 |
End bp | 3281843 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548048 |
Product | protein of unknown function DUF899 thioredoxin family protein |
Protein accession | YP_001669160 |
Protein GI | 167033929 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0915809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTA GCGACAGCAG GCACCCGGTG GTTTCTCGCA GCCAGTGGCT GGCAGCTCGC CGGCAACTCT GGCTGCACGA AAAAGCCTTT ACCCACCACC GCGACGCGCT GGCCGCAGCC CGTCGCGCCC TACCTTGGGT CAAAGTCGAA CACGACTATC GTTTCAACGG GCCGGACGGC GAGTTGAGCC TGGCCGACCT GTTCGCGGGT CGCAGCCAAT TGCTGCTTTA CCATTTCATG TTCGCCGAGG GCTGGAGCGA GGGCTGCCCC GGTTGCTCGT TCCTGGCTGA CCATTTTGAC GGTGCCAACT TGCACCTTGC ACACCACGAC GTGTCCCTGG TTGCGGTATC GCGGGCACCG TATGCCGAGT TCCAGGCGTT CCGTCGACGC ATGGGCTGGC AGTTCCCGTG GTACTCGTCA CACGGCAGCG GTTTCAACGA AGACTTTGGC GTAAGTGTCG GCAACGAGGG TGAACGGCAG TACAACTATG AGCCGTATAA CGGCAGTGAA AGCGAGCTGC CTGGCTTGAG TGCGTTCTAC CGCGAAGCGG ACGGCAGCGT GTACCACACC TACTCAACCT ACGCCCGCGG GCTGGACATC CTGGTCAATA CCTACAACTT CCTCGACATT GCGCCACTGG GACGCAATGA AGGCGGGACC ATGGACTGGG TGCGGCACCA TGACCGCTAT GAAGGGCAGC CAGACAAGGC ACACTGCTGT CACAACTGA
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Protein sequence | MSTSDSRHPV VSRSQWLAAR RQLWLHEKAF THHRDALAAA RRALPWVKVE HDYRFNGPDG ELSLADLFAG RSQLLLYHFM FAEGWSEGCP GCSFLADHFD GANLHLAHHD VSLVAVSRAP YAEFQAFRRR MGWQFPWYSS HGSGFNEDFG VSVGNEGERQ YNYEPYNGSE SELPGLSAFY READGSVYHT YSTYARGLDI LVNTYNFLDI APLGRNEGGT MDWVRHHDRY EGQPDKAHCC HN
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