| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2870 |
|---|
| Symbol | |
|---|
| ID | 5870656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3221721 |
|---|
| End bp | 3222695 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547988 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001669100 |
|---|
| Protein GI | 167033869 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACC AATTCCCGTC CGTTCGTCCC CGCCGCCTGC GCCAGAACGA GTCCCTGCGC
ACGATCTTCC AGGAAACCGA GTTCCGCCTG GAAGACCTGA TCCTGCCGAT CTTCGTCGAG
GAGGGTATCG ATGATTTCGT GCCGATCACC AGCATGCCCG GTGTCAACCG CATCCCCGAG
AAGCTGCTGG CCCAGGAAAT CGAGCGCTAT GCCCGTGCCG GTATCAAGTC GGTGATGACC
TTTGGCGTCT CGCACCACCT GGACGCCACT GGTAGCGACA CCTGGAACGA AAACGGCCTG
GTCGCGCGCA TGTCGCGCAT CTGCAAGGAC ACCGTGCCGG AAATGGTGGT GATGTCCGAC
ACCTGCTTTT GCGAATACAC CAGCCACGGC CACTGCGGTG TGCTGCATGA CCACGGTGTG
GACAACGACG CCACCCTGGC CAACCTGGGC AAGCAGGCGG TCATCGCCGC GGCGGCGGGT
GCCGACTTTA TCGCCCCGTC GGCGGCGATG GACGGCCAGG TACAGGCTAT CCGCAGCGCG
CTGGATGGTG CCGGTTTCCA CGACACTGCG ATCATGGCCT ACTCGACCAA GTTCGCCTCG
TCGCTGTATG GCCCGTTCCG CGAGGCCGGC GGCACTGCGC TGAAAGGTGA CCGCAAGAGC
TACCAGATGA ACCCGATGAA CCGCCGCGAA GCGGTGCGCG AGTCGCTGCT CGACGAGCAG
GAAGGTGCGG ATGTGCTGAT GGTCAAGCCG GCCGGTGCCT ACCTTGACGT GATTGCCGAC
ATTCGCGCAG CCTCGCGCCT GCCGCTGGCG GCGTACCAGG TGAGTGGCGA GTACGCGATG
ATCAAGTTTG GCGGCCTGGC CGGCGCCATC GATGAAGGCC GGGTGGTGCG TGAAAGCATC
GGCGCGATCA AGCGTGCCGG TGCCGACTTG ATCCTGACTT ACTTCGCCAT GGACCTGGCC
CGCGAAGGTA TCTGA
|
|---|
| Protein sequence | MSNQFPSVRP RRLRQNESLR TIFQETEFRL EDLILPIFVE EGIDDFVPIT SMPGVNRIPE
KLLAQEIERY ARAGIKSVMT FGVSHHLDAT GSDTWNENGL VARMSRICKD TVPEMVVMSD
TCFCEYTSHG HCGVLHDHGV DNDATLANLG KQAVIAAAAG ADFIAPSAAM DGQVQAIRSA
LDGAGFHDTA IMAYSTKFAS SLYGPFREAG GTALKGDRKS YQMNPMNRRE AVRESLLDEQ
EGADVLMVKP AGAYLDVIAD IRAASRLPLA AYQVSGEYAM IKFGGLAGAI DEGRVVRESI
GAIKRAGADL ILTYFAMDLA REGI
|
|---|
| |