| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2865 |
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| Symbol | |
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| ID | 5870651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3213205 |
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| End bp | 3216189 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547983 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001669095 |
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| Protein GI | 167033864 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA CGCCCAACCG CCTGGCCCTG TGCATCGCCC TGGCCTGTGC TGCCTTCGCC
CCCAGCGCCT TTGCCAAGGA TTACCTGATC GACCGCGCCA GCACCGACAC CCTGGAGCTG
AAAAAGTCCG ACACCTTGAT AGTGACGGCC AGTGGCAGCA TCGTGGCCAG TGACGACGAC
GGCGTGATTT TGCCCAAGCA CACCAGTGGT GCAACGGTGA GCGTCGATAA CGCCGGCATC
ATCCGCTCAA CCGATGGCCG TGGCATTGAC AGCAAGGGCG ACGGCGAAGA CCTCAGCCAC
TTCGTCATCA CCAACCACGC CGGGGGGCTG ATCCAAGGCA GCAACGACGG CTTGCGCTTG
CAGACCAACC CTGCCGCCGG CGGTAGCCTG AGCATCATCA ACGCGGGCAC CATCGCGTCC
ACCGTCGACG GCCAGGCCAT CGACCTCGAA ACGCTGAACA ATCCAGCGTT CACCACCACC
CTGGAGAACC AGGCCACAGG CGTGATCCAC GCCGTAGGCA ACGACGCGAT CAAGACCGGC
TCCAACGCCA CGATCACCAA CTACGGGCTG ATCTACACCG ACACCGCGCC ACAGGACAAG
AACGGCCTGG ACCAGAAGTG GGACGGCATC AAGATCGGCA CTTCTACCGG GGTCACCGTG
TACAACCACG GCACCATCAG CGCCGACCGC CACGGCGTCG ACCTGAAGAC CGATGCCACG
CTGTACAACT ACGAGGGCGC CAGCGTTACC GGGCGCAACG GTTCGGGTTT CGGCTCCGAC
GGCAGCGGCA CGGTGTACAA CTGGGGCACC ATCACCGGTG CCATCGCCGA CGGCAAGATC
AATGGCGACG GCGATGGCGT CGATATCGAC AACATCGGCC ATGTATACAA CGCCGGCACC
ATCCAGGGTT TGGGCGCCAA GGGCGTCGAC AGTGGTGGCC GGCCAAATGG CAGCGAAGGC
ATTGCCATGG GCGGTGGCAG CATCGTCAAT ACCACCAGTG GGGTCATTCG CAGTGTCGAC
AACGGCATCC TGGTCGATGA CGGCGCCGAA GGTGCCGGTG TGGCCGCGAC CACTATCAGC
AACGCCGGAC GCATCGAGGG CGAAGGCGGC TTTGGCATCA AGCTGATCGG CGAGTACGAC
GACAGCGTGA TCAACAGCGG GACTATCAGC GGTGGCAACG GCCTTGCGCT GAGCATGGGT
GCCGGCAACG ACAGCCTCAC CGTGCTGACT GGTGGCACGT TCAACGGCCT GGTCGATGGC
GGTGCTGGCA TCGACAGCCT GACCCTGAAC GGCACTGGCA ACTTCGGCAA CAGCGCCAAC
TTCGAAACCT TGAAGGTCAG CGGCGGCAGT TGGACCCTGA CCAGCCTCGA AGACTTCAGC
CAAGGTGGCG TGGTGAACTC GGGCGCCACG CTGATCAATC AGGGCAGCAT CCTCGGCTCG
ATGTTGATTG AAAAAGGCGC CACGTATGCC GGTGGCGGGT CGGTCGGCGG GCTGCAAGTG
AACGGCACCC TGCTCACCAA CACCGGCCTG GGCGTCGCCG CCGTTGCGGG CGACCTGAGC
TTTGGCCAGG GTTCAAGCCT GGTGTATGGC GTCAACGCTG ACGGCAGCAG TGCACCGATC
CATGTCAGCG GTACTGCCAA CCTCGATGGC GCCACGTTGC ATGTGCAGCC AAGCGCCGGC
GAATACCCGT GGCAGAGCCA CTACACCGTG CTGACCGCCG GTGCCGTGAA CGGCACCTTC
ACCCAAGTCA GCAGCGACTA TGCCTTCCTC ACCCCTACCC TGCGCTACAA CAACACCTCG
GTAGGTCTGG ACTACACCCG CAACGACGTA GCCTTCGAGC ACTATGCACC GTCCGCCAAC
GCGGCTGGCG CTGCGCGTAG CCTGGCCAGC CTCGGGCAGA ACAGCAACCT GTACAACGCC
GTGCTTGGTA CCACCGCAGC CGGTGCCGGC AATGCCATCG AGCAGCTGTC CGGCAGCAAT
ACCGCCAACC TCGCGGCCGC CACCCTGGCT GGCGCGTCGC AGGTCGGCAG CAGCATGCTC
GGCGCGATGC AGGCAATGGG CAGCGCTGGC GGCCTGCTGG TTGGCCTGAG CGACAGCGAC
GGCCCGGCGC TGGCCGCAAC CGGCGTGCCG CGTGAAGCGC GCAACCTCAA CGACCCGACT
GCCCAGGGGC GCGTCTGGGC ACAGGCGCTG GGCAGCTACG GCAAGGTCGA TGGCAGCCAT
GGCGCCAGCA CACTGGAGCA GCGTACCGGC GGTGGTGTGC TGGGCGTCGA CTGGGCGTTG
GCTGGTGACT GGCGCGTGGG CCTGCTGGGT GGCTACTCGC ACACCCGCCT GGACGCCACT
GGCCTGGATG GCACGGTGCG CAGCTGGCAC GCTGGCGTCT ACGCCCAGCA TCAGAGCGGC
CCACTGGCCG TGCGCCTGGG TGCGGCGTAC AGCAGCCACG ACGGCGACAG CAAGCGCGAC
GTGGCGTTTG CCGGTTTCAA AGAGCGCCTC GAGGGTGACT ACGACGCCGA CAGTCAGCAG
GCCTTCATCG AGCTGGGTTA CGCCATGGGC AGCGGTCGCC TGAGCGCCGA GCCGTTCGCC
AACCTCGGCT ACCAGCGCTA CCACCGCGAC AATTACCGGG AACAAGGCGG CGATGCGGCG
CTGGCCGTGG ACGCCGATAC CCAGGACAAC GTCAGCAGCA CCTTCGGTGT GCGCCTGGCG
CACCTGGGGC AGCTGGACAA CGGCATGAGC CTGACGCCAC GGGCGACCCT GGGCTGGCGG
CACACTTACG GCAGCATCGA TACCCGCACG CGGCAGGCGT TTATCGCAGG GGGTGATGCG
TTCAGTGTCG AAGGCAGTGC GATCGACCGC GACAGCTTGC TGGTCGAGGC CGGGCTGGAC
CTGGGGCTGA GTGCGCGGCA AAGCGTAGGC ATCGGGTATA GCGGTGAACT GGGCAGCAAC
AGCCGTAACC ATGCGGTGGT TGGGCAGTGG CAGTTGAAAT TCTGA
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| Protein sequence | MHFTPNRLAL CIALACAAFA PSAFAKDYLI DRASTDTLEL KKSDTLIVTA SGSIVASDDD
GVILPKHTSG ATVSVDNAGI IRSTDGRGID SKGDGEDLSH FVITNHAGGL IQGSNDGLRL
QTNPAAGGSL SIINAGTIAS TVDGQAIDLE TLNNPAFTTT LENQATGVIH AVGNDAIKTG
SNATITNYGL IYTDTAPQDK NGLDQKWDGI KIGTSTGVTV YNHGTISADR HGVDLKTDAT
LYNYEGASVT GRNGSGFGSD GSGTVYNWGT ITGAIADGKI NGDGDGVDID NIGHVYNAGT
IQGLGAKGVD SGGRPNGSEG IAMGGGSIVN TTSGVIRSVD NGILVDDGAE GAGVAATTIS
NAGRIEGEGG FGIKLIGEYD DSVINSGTIS GGNGLALSMG AGNDSLTVLT GGTFNGLVDG
GAGIDSLTLN GTGNFGNSAN FETLKVSGGS WTLTSLEDFS QGGVVNSGAT LINQGSILGS
MLIEKGATYA GGGSVGGLQV NGTLLTNTGL GVAAVAGDLS FGQGSSLVYG VNADGSSAPI
HVSGTANLDG ATLHVQPSAG EYPWQSHYTV LTAGAVNGTF TQVSSDYAFL TPTLRYNNTS
VGLDYTRNDV AFEHYAPSAN AAGAARSLAS LGQNSNLYNA VLGTTAAGAG NAIEQLSGSN
TANLAAATLA GASQVGSSML GAMQAMGSAG GLLVGLSDSD GPALAATGVP REARNLNDPT
AQGRVWAQAL GSYGKVDGSH GASTLEQRTG GGVLGVDWAL AGDWRVGLLG GYSHTRLDAT
GLDGTVRSWH AGVYAQHQSG PLAVRLGAAY SSHDGDSKRD VAFAGFKERL EGDYDADSQQ
AFIELGYAMG SGRLSAEPFA NLGYQRYHRD NYREQGGDAA LAVDADTQDN VSSTFGVRLA
HLGQLDNGMS LTPRATLGWR HTYGSIDTRT RQAFIAGGDA FSVEGSAIDR DSLLVEAGLD
LGLSARQSVG IGYSGELGSN SRNHAVVGQW QLKF
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