| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2856 |
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| Symbol | |
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| ID | 5870642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3199930 |
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| End bp | 3203148 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641547974 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669086 |
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| Protein GI | 167033855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.563865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.366632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTA GCCAACGTAT CGCCATTGCG GTAGCCGAAG CTGGGCTGCC GCACGACCAG
TGCATGTCCT GCGAGCGGCA AGGCCTGCCG ATTCTGCCAC TGCGCCGCGC CCTGGTGCCG
GATGCGCGCC CAGGTTGCAT CACCACCGTT GCCGGCAGCC TGCATGTCTC GACGAAGATG
GGCCTGCGTA CCTTGCGCAT GGGCTACCTG TATGTGCTGC TGGACCAACA GGTCTGGCAT
GCCTACGAAG TCAGCGAACA GGGCCACCTG CGCCGTTTCA ACCCCTATGA ACCGTCCGAC
GGCCTGCCCG CGTCACTCCC CGAAAAGTGC GTTAATGAAA ATCACGACAT TCCCTCATCT
TTCCTGAACA TTGATACCGA CCGCTATGGC AGTGCCTGGC TGGCCTTTTC GAGCGACCCT
TGGCCGGTGA GCGTGCTGAA TGCCTACAAA CGCGGCACGG CACCTGCACA TCGCTTTGAG
GGTTTGGACC TGACCCAGGC GCGCAACAAC CCTGAATTGC TGGGCATCGC CATGACGCCT
GACAACCTGC AAATCGACAA GGAGGTACTT GAGTACGCGC AGCACGGGTG TTCGCCGTTC
GACAGTGCGC ATGGCTTTCA CAGCCGTTGG CTACGCCGGT TCGCCCTGAA GGGGTATCTG
GTCAACGCGA TGAACCGGCA CACGCTGGAA AACGGCGTGC TGGCGGTGGT GCTCGACGAT
ACGGTTGGCT TGATTCAGGA GTACAACCAT CAACGGCTGA ACTGGGTGGT GAAACGCCAG
GTCTGGCGCG AAGAGCCCAT GCGGGCTTAT CAGCTACAGA CTTCGCAGAT TTTGCAGATT
ATTCGCGCCA CGCAGAGGGA GAGGGCAGCA CAGAACGTGC CGTCACTTGA GTCGATGGCG
AACAGAGGGC CGTTTGTACC GATTGACCCG ACGGTAGAGC GACCACGAAT GGTCGAGCAA
GCACAGAAGG ACAGTGAGGA TAAGCTCGAG CAGCGCTATC ACGAACCGCA ACGGGCGGCG
TTCCAGGCCG AGTACGACCA GCAGGAAGCC GAGTTCCAGC GCTACATCGA CAAGGGCGCC
CGTGCGTATG CCGCGCTGTT CGACACGCCC ATGTTCAAGG TGGCAGAGCA GTACGATTAC
GACAGTGATC ATCGTGAGTC TGGCGTGGCG TATGCCAAGA CCATGGCATT GTGCCTGGGC
GGCGGTATCA CCGAGGCCGT GGCACCCGGT ACGCTGCCTG CGGCCGGCAC CAGCGAAACG
CTCTGGCATA AATGGCTGCA AGACCCCAAC AGCCCACCTT ACCGCGCATT GTTGATGCGT
GACCGTGCAT TGCTGGCTGG GCTGCTGCCC AGTTTTACCG CTGCCGAAGC CATCAACTGG
AACGACAGCG ACAAGCTCTA CGGCATCCTG AGCAAGATCA TCGCCAGTGA CGACGCAGGC
CTGCGCATGC GCAACACGCT CAAGCAGGCC ATCGCCGAAA CGCAGAGTGC GCTCAATGCG
GCCAGCCAGC GCCTGGCGCC CAACTTGCTC CCTGGCATTC AAAACGCCGT GCGGCACCTG
AACAGCGCGA CGCAGTTCCT CTACAACGGC GTGCACCTGA TCGAACTGGA AGTGAAGATG
AAGCTGGGCG AGTACTACGC CTTGCAGAGT GCCCACTTGC GCGAATTGCA GCACAAGGCC
AATGCCTCCA TCGCCGAGGC ACGGGACCGG ATGCATCGCA GCATCGATGA CTTCGAATTT
GGCTCGATGA AGCCGTTCCG CAAGGTGCGG CCGATCATCC AGCATGGGTT GATGAGCCTG
GCCGTGCTCG ACCCGCGGTT TACCAACACC ATGATCAGCG TAACGGTGTG GGTCGAGGGC
ACGGCTGAAG AGGTGCGTGG CCGGTTGTTT GAGGAAGCCA ATATGAAGGT GACCCAAGTC
AGCAGCGCGG CACAGATTGC CTTGGTGGAT GTCTCGGTGG CGGCGGGGAC GCTAGAGGCG
AATGCGCGCA AGGTGTTGCA GGGGATGAAG ATCACTTCGC AGCAGACGGC GCAGTTGGTG
AGCACTGGCT TCAGAGGGTT GCGCGGTGTG GCGGGAAGTT GGGAAGTATT GCTGGCAATT
GGAGGGCTGT ACTTTCAATA CGACAGCCTG GTCAGGAACC AGGAAAAAGC GGAAGCGGAG
GTTGGGCCGA AGGCTCATGA GGCCAAGTTG GCGTTGCAAG GCTCAACACT GGGGGTGCTT
GGGGGGCAAA TCGAGTTGGT TGGATTAGTC ATGAGATCGG GTGCTACTCA TGAAAAAATG
CCGTGGACTA GGGGAGTCGC AGCTTCTGGG GAGGTCTTCA TAAAACTTGG TGCAATTGTA
AGTTCTGTTG CTGGTGTCTT TGACATGGCT CAGGCAGTCG CTGCAAGTAG GCGGGCTAAG
GCAGCTGGAG ATAGTGTGGC AAAAAATCAG CATATATTGG CTGCCGCGCT TTATGGCTCT
GGGTCTTTAG TATTTGCGGT GGCGGTTTTT AAAACCTCTT TGCTGGGGCC TTTAGGGGTT
GCTGTAATAT TGGTATTAGT AGCATATGCA CTAAGCAAGC ATGCCGAATG GAACGAGTCG
TCCCTATTAG AGCGTTGGGC AAGACGATCC TGCTTTGGGA AGGCAGATGA GGTGCCAGTT
GTTCACTGGA AAACTCCCGA ATATGCAGAT ATTGCGTTTG CAGAGCTCAA TGCAGTTACA
TTGGGCGTAA AAGCAATGCT GCATTTCGAG TCGAGCCTCA TAACCGATCC TGCAGTGCCA
CGGATAGGAG GGTTGGTCGG ACTGGAAAGA GAGCAGATGC TGAAGTTTAA AATATTGTTA
CCTGGGTACA AAGAAGAGGT CTCCGCTTAT CGTTGGATTT TGGTGGTGCA TCGCAATGGT
GATGGAGAGT TCCCTAAGTA TACTGGTGGG GAACGCCTAT TTATTGATGA GTATCATGCT
TTATCTGTAG GTCCCATTAC TGAAGCTGTT AATTTTTCAA ATTTTTCTCC GCCTCGGGTT
CCTGACTATA AGAGCAGTTT TGTTGTTGAT AAAAGAAATC ATGTGGCTGC GATAGGCGAG
GCTGAGGCCA TTAGCTTGGA GATATCTGGA AGAGTGGATC TTATGCCTAC GATCGGGAGC
CATTCCATAC TTGCAGCAAC ACTGTTACTG ATGTATTGGC CAGATCGAAA TATAGATAGT
GCGTATGTCG AGGTGTGTAG TCGGGGGCTA AATGATTGA
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| Protein sequence | MTLSQRIAIA VAEAGLPHDQ CMSCERQGLP ILPLRRALVP DARPGCITTV AGSLHVSTKM
GLRTLRMGYL YVLLDQQVWH AYEVSEQGHL RRFNPYEPSD GLPASLPEKC VNENHDIPSS
FLNIDTDRYG SAWLAFSSDP WPVSVLNAYK RGTAPAHRFE GLDLTQARNN PELLGIAMTP
DNLQIDKEVL EYAQHGCSPF DSAHGFHSRW LRRFALKGYL VNAMNRHTLE NGVLAVVLDD
TVGLIQEYNH QRLNWVVKRQ VWREEPMRAY QLQTSQILQI IRATQRERAA QNVPSLESMA
NRGPFVPIDP TVERPRMVEQ AQKDSEDKLE QRYHEPQRAA FQAEYDQQEA EFQRYIDKGA
RAYAALFDTP MFKVAEQYDY DSDHRESGVA YAKTMALCLG GGITEAVAPG TLPAAGTSET
LWHKWLQDPN SPPYRALLMR DRALLAGLLP SFTAAEAINW NDSDKLYGIL SKIIASDDAG
LRMRNTLKQA IAETQSALNA ASQRLAPNLL PGIQNAVRHL NSATQFLYNG VHLIELEVKM
KLGEYYALQS AHLRELQHKA NASIAEARDR MHRSIDDFEF GSMKPFRKVR PIIQHGLMSL
AVLDPRFTNT MISVTVWVEG TAEEVRGRLF EEANMKVTQV SSAAQIALVD VSVAAGTLEA
NARKVLQGMK ITSQQTAQLV STGFRGLRGV AGSWEVLLAI GGLYFQYDSL VRNQEKAEAE
VGPKAHEAKL ALQGSTLGVL GGQIELVGLV MRSGATHEKM PWTRGVAASG EVFIKLGAIV
SSVAGVFDMA QAVAASRRAK AAGDSVAKNQ HILAAALYGS GSLVFAVAVF KTSLLGPLGV
AVILVLVAYA LSKHAEWNES SLLERWARRS CFGKADEVPV VHWKTPEYAD IAFAELNAVT
LGVKAMLHFE SSLITDPAVP RIGGLVGLER EQMLKFKILL PGYKEEVSAY RWILVVHRNG
DGEFPKYTGG ERLFIDEYHA LSVGPITEAV NFSNFSPPRV PDYKSSFVVD KRNHVAAIGE
AEAISLEISG RVDLMPTIGS HSILAATLLL MYWPDRNIDS AYVEVCSRGL ND
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