Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2807 |
Symbol | |
ID | 5870593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3152283 |
End bp | 3153923 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547925 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001669037 |
Protein GI | 167033806 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.988252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTA CCCGCGTCAT GCCCCCGGCC GAGCAGGCCT ATGCGTACCC GCTGCTGATC AAGCGCCTGC TGTTGTCGGG TGTGCGCTAC CAGCCCAACC AGGAAATCGT CTACGCCGAC AAGCTGCGCT ACACCTACAC CACGTTGCTG GAGCGTATTC AACGGCTGGC CAACGTGCTG AGCGCTGCCG GGGTCCAGCC TGGCGACACC GTGGCCTTGC TCGACTGGGA CAGCCACCGC GCATTGGAGT GTTTCTTCGC CGTACCCATG CTGGGCGCAG TGTTGCATAC GGTAAACGTG CGGTTGTCCA GCGAGCAGGT GCGCTACACC ATGAACCACG CCGAGGACCG GCTGGTGCTG GTGCACGACG ACTTCCTGCC GTTGATGCAG CAGCTGCGCG CCGACCTGCC GACAGTGGAG GGCTTCATCC GCCTGAGTGA CGGCGGTCAC GCCGCGCAAG GCGTGCCTCT GCTGGGCGAG TACGAAACCA TGCTGGCGGC TGCAGAACCG TACTTCGAAT TCCCGGACTT CGACGAAAAC TCGCTGGCCA CGCTGTTCTA TACCAGCGGT ACCACCGGCA ACCCCAAGGG TGTGTACTTC AGTCACCGGC AACTGGTGCT GCATACCCTG GTCGAGCAGG GCACTTTGGC CGCGTGCGGT GAGGTACCGC TGCTGCGCAC CGGCGATGTG TACATGCCGA TCACGCCCAT GTTCCATGTG CATGCCTGGG GCGTGCCTTA CGTGGCGACG GCACTTGGCA TCAAGCAGGT CTACCCGGGG CGCTACGAGC CCAACCGCCT GGTGCGCCTG TTCCATGAGG AGGGGGTGAC CTTCTCCCAT TGCGTGCCAA CGGTGCTGCA GATGATGCTC GACAGCGAGC AAGGGCGCCG CACCGACCTT GCCGGCTGGA AAATGCTGCT GGGCGGCAGC GCGCTGACCC TGGGCCTGGC CCAGCGCGCC AGCGAGCGCG GCATCAGCGT GCACTGTGGT TACGGCATGT CGGAAAGCTG CCCGCTGCTC AGCATCACCT ACCTGAGTGC CGAGCTGCTG GCAAAGCCCA TGGCGCAACA ATTGCCGCTG CGCATCGATG CCGGTGTGCC GATTGCCATG GTGGACCTGC GTATCGTCGA CAGCGAGGGC CGGGAGGTGC CGCACGACGG TGAAAGCCTG GGTGAAGTCG TGGTGCGCGC GCCTTGGCTG ACCCAAGGCT ACCTGCACGA ACCGGAGCAA GGCGCAGCAC TGTGGTTGGG GGGCTGGATG CACACCGGTG ACCTGGCTTG TATCGATGCG GCGGGCGTGG TGCGTATCCG CGACCGGATC AAGGACGTGA TCAAGACCGG TGGCGAGTGG GTCAGCTCGG TAGCGCTGGA AAACCTGATC AGCCAGCACC CGTTTGTCGC CTCGGTGGCT GTCGTCGGTG TTCCTGATCC ACAGTGGGGG GAACAACCCT TGGCCTTGGT GGTCTGCTGT GAGGGTGTGC AACTGGACCA GCCGTCATTG GCCAGGCACC TGCAGCCGTT TGTCGACAGC GGGCACTTGA ACAAGTGGGC GATACCACGG CAGTTGCGTT GTGTGGACGA AATCCCCCGG ACCAGTGTCG GCAAGATCGA CAAGAAACGC ATCCGCCAGA CGGAAGTCTA G
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Protein sequence | MITTRVMPPA EQAYAYPLLI KRLLLSGVRY QPNQEIVYAD KLRYTYTTLL ERIQRLANVL SAAGVQPGDT VALLDWDSHR ALECFFAVPM LGAVLHTVNV RLSSEQVRYT MNHAEDRLVL VHDDFLPLMQ QLRADLPTVE GFIRLSDGGH AAQGVPLLGE YETMLAAAEP YFEFPDFDEN SLATLFYTSG TTGNPKGVYF SHRQLVLHTL VEQGTLAACG EVPLLRTGDV YMPITPMFHV HAWGVPYVAT ALGIKQVYPG RYEPNRLVRL FHEEGVTFSH CVPTVLQMML DSEQGRRTDL AGWKMLLGGS ALTLGLAQRA SERGISVHCG YGMSESCPLL SITYLSAELL AKPMAQQLPL RIDAGVPIAM VDLRIVDSEG REVPHDGESL GEVVVRAPWL TQGYLHEPEQ GAALWLGGWM HTGDLACIDA AGVVRIRDRI KDVIKTGGEW VSSVALENLI SQHPFVASVA VVGVPDPQWG EQPLALVVCC EGVQLDQPSL ARHLQPFVDS GHLNKWAIPR QLRCVDEIPR TSVGKIDKKR IRQTEV
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