Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2793 |
Symbol | |
ID | 5870579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3139914 |
End bp | 3140684 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547911 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001669023 |
Protein GI | 167033792 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.313223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.208363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCA ACGGCAAGAC TGCACTCGTC ACCGGTTCCA CCAGCGGCAT CGGCCTGGGC ATCGCCCAGG TGTTGGCCCG CGCGGGTGCC AACATCGTGC TCAACGGCTT TGGCGACCCG GCACCGGCCA TGGCCGAGAT TGCCCGGCAC GGGGTGAAGG TGGTCCATCA CCCGGCAGAC CTGTCGGACG TGGCCCAGAT CGAGGCCTTG TTCAACCTGG CAGAAGGCCA ATTTGGCGGC GTCGACATTC TGGTCAACAA CGCCGGTATT CAGCATGTGG CGCCGGTGGA GCAGTTCCCC ACCGAAAGCT GGGACAAGAT CATTGCCCTG AACCTGTCGG CTGTATTCCA TGGCACCCGT TTGGCGCTGC CGGGCATGCG CACGCGCAAC TGGGGGCGGA TCATCAACAT CGCTTCGGTG CATGGTTTGG TGGGTTCGAC CGGCAAGGCA GCCTACGTGG CGGCCAAGCA CGGTGTAGTC GGGCTGACCA AGGTGGTAGG CCTGGAAACC GCCACCAGCA AGGTCACCTG CAACGCGATC TGCCCAGGTT GGGTATTGAC CCCGCTGGTA CAGAAACAGA TCGACGATCG TGCCGCCAAC GGTGGCGATC CACTGCAAGC GCAACACGAT CTATTGGCAG AAAAGCAACC GTCCTTGGCC TTCGTTACCC CCGAGCACTT GGGTGAACTG GTACTATTCT TGTGCAGCGA GGCCGGTAGC CAGGTTCGCG GCGCCGCCTG GAACGTCGAT GGTGGCTGGT TGGCCCAGTG A
|
Protein sequence | MTLNGKTALV TGSTSGIGLG IAQVLARAGA NIVLNGFGDP APAMAEIARH GVKVVHHPAD LSDVAQIEAL FNLAEGQFGG VDILVNNAGI QHVAPVEQFP TESWDKIIAL NLSAVFHGTR LALPGMRTRN WGRIINIASV HGLVGSTGKA AYVAAKHGVV GLTKVVGLET ATSKVTCNAI CPGWVLTPLV QKQIDDRAAN GGDPLQAQHD LLAEKQPSLA FVTPEHLGEL VLFLCSEAGS QVRGAAWNVD GGWLAQ
|
| |