| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2779 |
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| Symbol | |
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| ID | 5870565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3123125 |
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| End bp | 3123631 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547897 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001669009 |
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| Protein GI | 167033778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.310958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.121216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG CCGACCCTAC CCTGAACCTG CAAGTCCAGA CGCTGTACAC CGAGCACCAT
GGCTGGCTGC AGGGCTGGCT GGGGCGAAAA CTGGGCAATG CCTGCGATGC CGCCGACCTG
GCTCATGACA CGTTCGTGCG CCTGCTCAGC CGGCAGGGCA ACAGCTTTTT CGGCAATGAA
CCCCGGGCCT TGCTGACCCA CATCGCAAAG GGCCTGGTGA TCGACCGCTG GCGCCGCCAG
GAAGTCGAGC GCGCCTACCT GGAAGCCATC GCACACTTGC CGCAACCCGA GGTGCCCTCG
CCGGAAACGC GCTGGCTGAT CCTCGAAACC CTGTACCGCA TCGACGCCAT GCTGCGCGAC
ATGCCGGCCC GTGTACGTCA GGTGTTCCTG CTGTCGCAGC TGGACGGGCT GACCTACGCA
CAAATTGCAG AACAGCTGCA GGTTTCGCTG ATCACCATCA AGCGCGACAT GCGCACGGCT
TTCCTTGCCT GCCTGAGCAT CGACTGA
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| Protein sequence | MPPADPTLNL QVQTLYTEHH GWLQGWLGRK LGNACDAADL AHDTFVRLLS RQGNSFFGNE
PRALLTHIAK GLVIDRWRRQ EVERAYLEAI AHLPQPEVPS PETRWLILET LYRIDAMLRD
MPARVRQVFL LSQLDGLTYA QIAEQLQVSL ITIKRDMRTA FLACLSID
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