Gene PputGB1_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2765 
Symbol 
ID5870551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3101078 
End bp3102580 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID641547883 
ProductEvpB family type VI secretion protein 
Protein accessionYP_001668995 
Protein GI167033764 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0505652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.262675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AGCAAACCGC ACCGCAACAG GCCGGCGAAC TGGTCGAAGT GGAAAACTTC 
GCCCCACAGC CCTCGCTGCT GGACAGCATC ATTTCGCAAA GCCGCGTGGC CCGTTCCGAC
ACCGAGCGCA ACCGCACCCG CGACCTGATC GGCGAACTGG TGAACCAGGT GCTCGAAGGC
GAAATGACCC CGAGCAAGGA CCTGATCGCC GTGCTCGATT CGCGTATCGC CGAAATCGAC
GCGATGCTCT CCGAGCAGAT GAACGAAATC ATGCACGCTC GCGAGTTCCA GCAGCTGGAA
GCTTCCTGGC GTGGCCTGAA GTACCAGGTA GACCAGACCG AAACCAGCAC CACGCTGAAG
ATTCACCTGC TCAATGCCTC GAAGAAAGAC CTGGTACGTG ACCTGAAGGC CGCCAGCGAA
TTCGACCAGA GCGCACTGTT CAAGAAAGTC TACGAAGAAG AATACGGCAC CTTCGGTGGT
GCGCCGTTCG GCATGCTGAT CGGCGACTAC GAGTTCAACC GCAACCCCGA AGACATGTAC
CTGCTGGAAG AGATCTCGCA CGTGGCCGCA GCGGCGCACG CGCCGTTCAT CTCCGCCGCC
TCCCCTGAAC TGTTCGGCTG GGACTCGTTC ACCGAGATGT CCGGCCCGCG TGACCTGGCG
AAGATCTTCG ACACCGTCGA ATACGCCAAG TGGAAGTCGT TCCGCGCATC GGAAGACTCC
CGCTACGTCG GCCTCACCCT GCCCCACGTG CTCGGCCGCC TGCCGTATGG CCCCGATACC
ACGCCGGTGG AGGAATTCAA CTTCGTCGAA AGCGTCGACG GCCGCGACCA CAACAAGTAC
CTGTGGATGA ACGCCGCCTA TGCCCTTGGC ACCCGCGTCA CCGATGCCTT CGCCCGCTAC
GGCTGGTGCG TGGCCATCCG CGGCGTGGAA GGGGGCGGCC TGGTCGAAGG CCTGCCGACC
CACACCTTCA ACACCGACGA TGGCGAAATC GCCCTCAAGT GCCCTACCGA AATCGCCATT
ACCGACCGCC GCGAAAAAGA GCTGTCGGAC CTGGGCTTCA TCCCTCTGGT GCACTGCAAG
GGCACCGACT ATGCCGCCTT CTTCGGCACC CAGTCGGCGC AGAAGCAAAA GCAGTACAAC
ACCGACATCG CCAATGCCAA TGCACGCCTG TCGGCCCAAC TGCAATACAT CTTCGCCACC
TCGCGTATCG CCCACTACAT GAAGGCGATC ATGCGCGACA AGATCGGCAG CTTCGCCTCG
CGCATGGACG TGGAGCGCTT CCTCAACCAG TGGCTGGCCA GCTATGTGCT GCTCGACGAT
ACCGCCAGCC AGGAAGCCAA GGCCAAGTTC CCGCTGCGTG AGGCCCGCGC CGAGGTGTTC
GAGGTGCCAG GCAAGCCAGG CGTGTACAAG GCCGTCACGT ACCTGCGCCC GCACTACCAA
CTGGACGAAC TGACCGCCTC GCTGCGGCTG GTCGCCGAGC TGCCACAAGG CGCGCGCGGC
TGA
 
Protein sequence
MTDKQTAPQQ AGELVEVENF APQPSLLDSI ISQSRVARSD TERNRTRDLI GELVNQVLEG 
EMTPSKDLIA VLDSRIAEID AMLSEQMNEI MHAREFQQLE ASWRGLKYQV DQTETSTTLK
IHLLNASKKD LVRDLKAASE FDQSALFKKV YEEEYGTFGG APFGMLIGDY EFNRNPEDMY
LLEEISHVAA AAHAPFISAA SPELFGWDSF TEMSGPRDLA KIFDTVEYAK WKSFRASEDS
RYVGLTLPHV LGRLPYGPDT TPVEEFNFVE SVDGRDHNKY LWMNAAYALG TRVTDAFARY
GWCVAIRGVE GGGLVEGLPT HTFNTDDGEI ALKCPTEIAI TDRREKELSD LGFIPLVHCK
GTDYAAFFGT QSAQKQKQYN TDIANANARL SAQLQYIFAT SRIAHYMKAI MRDKIGSFAS
RMDVERFLNQ WLASYVLLDD TASQEAKAKF PLREARAEVF EVPGKPGVYK AVTYLRPHYQ
LDELTASLRL VAELPQGARG