| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2764 |
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| Symbol | |
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| ID | 5870550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3100524 |
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| End bp | 3101063 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547882 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001668994 |
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| Protein GI | 167033763 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0599499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.364663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA AGGAAAGCAC TCAGCACAAA CTCGACCGCG TCCGCGCGCC TCGGGTCCAT
ATCACCTACG ACGTGGACAT CGGCGATGCC ATCGAGAAAA AGGAGCTGCC CTTCGTCGTC
GGCGTACTGG GCGACTTTTC CGGCAACCCG CTGGAGCCGC TGCCCAAGCT CAAGGACCGC
AAGTTCGTCT TCATCGACCG CGACAACTTC AACGGTGTGC TCAAGGGTAT CAAGCCACGC
CTGACCTACC GCGTCGACAA CACCCTGGCC AAGAACGGCA CCCAGCTGGG CGTGGAACTG
AACTTCAACA GCCTCGAAGA CTTCGAGCCA CAGAACGTGG TCAAGCAGGT GGAGCCACTG
CGCAAGCTGC TGGAAGTGCG CAACAAACTG GCCGACCTGC GCAACAAGAT GGGCGGCAAC
GACAAGCTCG AAGAGCTGCT GATGGACGTG CTGCAAAACA CCGAAAAGCT CAAGACCCTG
GGCAAGGAAT TCGGCCGTGA AGCCGAAGTG AAAGACCCAT CCAGCAGCGA TCGCGCCTGA
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| Protein sequence | MAKKESTQHK LDRVRAPRVH ITYDVDIGDA IEKKELPFVV GVLGDFSGNP LEPLPKLKDR
KFVFIDRDNF NGVLKGIKPR LTYRVDNTLA KNGTQLGVEL NFNSLEDFEP QNVVKQVEPL
RKLLEVRNKL ADLRNKMGGN DKLEELLMDV LQNTEKLKTL GKEFGREAEV KDPSSSDRA
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