| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2732 |
|---|
| Symbol | |
|---|
| ID | 5870520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3063557 |
|---|
| End bp | 3064099 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547853 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001668965 |
|---|
| Protein GI | 167033734 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTC GATTGAAACT GCTGCGTAAG AAACTGGGGA TGACCCTGGA AATGCTCGCC
GAAAAGACCG GCATGACCAA AAGCTACCTG TCCAAGGTCG AGCGCGGCCT CAACACGCCC
TCGATCGCGG CGGCGCTGAA ACTGGCACGG GCGCTGAACG TCAATGTCGA AGAGCTGTTC
GCCGAAGAAC AGGCTGGGCA GAGCCGCTAC AGCCTGGTGC GCCATGGCCA GCGCCAGGCG
TTGGTAGGCG ATGGGCAAGG GCCGGGATAC GCGGCCCTCA CCAGCCAGGT CGGCCAACGC
AGCCTGCTGC CGTTCCTGAT CCAGCCACCC TCCGAATTCA GTGACCCCAC GTTCAAGGAA
CACCAGGGCG AGGAGTTCCT GTTCGTGCAT GCTGGCCAGG TGGAAGTGGA CTTCATGAAC
GAACGGGTGC TGCTGGAACA GGGCGATGCC CTTCATTTCA ACGCCCAGAC GCCGCACCGG
CTACGCTCGG TAGGTGTCAC GCCGGCGCAG TTGCTGGTCG TGGTTCACCA CGCAGACGAG
TGA
|
|---|
| Protein sequence | MSIRLKLLRK KLGMTLEMLA EKTGMTKSYL SKVERGLNTP SIAAALKLAR ALNVNVEELF
AEEQAGQSRY SLVRHGQRQA LVGDGQGPGY AALTSQVGQR SLLPFLIQPP SEFSDPTFKE
HQGEEFLFVH AGQVEVDFMN ERVLLEQGDA LHFNAQTPHR LRSVGVTPAQ LLVVVHHADE
|
|---|
| |