Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2711 |
Symbol | |
ID | 5870499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3038787 |
End bp | 3040163 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547832 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001668944 |
Protein GI | 167033713 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.468733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA GTGTTTTCGA CCTTTTCAAA ATCGGCATCG GGCCGTCCAG TTCTCACACC GTCGGCCCGA TGCGGGCGGC CGCTACCTTT GCCCAGGCCC TGCGCGAGCA GGGGCTGCTG GCGCGGGTAA CGCGCGTGGA GGTGCGGCTG TATGGCTCGC TGTCGGCGAC CGGGGTTGGC CATGCCACCG ACCGTGCGTG CCTGCTTGGC CTGATGGGCC AGTGGCCAGA CCGCATCGAC CCAGCCACTA TCGAATCGCG TATAGGCCAG GCCCTGCAGG AGCACTGCCT GATGCTCGAT GGCAGCCATC CGCTGGCCTT CGAATATGGC CGTGACATGC TGCTGCTCGA CGAGAACCTG CCTTATCACC CCAATGCCAT GAGCCTGGAG GCCATGGACG GGCAGGGTAG CCTGTTGTGC CAGACGTATT ATTCGGTGGG CGGCGGTTTC ATCGTCGAGC AGGCCGAGAT CGATGCGCCG GCAGGCGAAA CGAATGCAGT GCGACTGCCC TATGAGTTCG ACAGTGGCGC CCAATTGCTG GCTTTGTGCA AGGGCCATGA CCTGAGCGTG GCGCAACTGA TGATGGCCAA CGAATGCGCC TGGCGCCCGG AGGCCGAGGT CCGGGAAGGG TTACTGCGCA TCTGGGCGGC CATGCGTGAG TGCGTGGCGA ACGGTCTGCG CAATGAGGGC ATCCTGCCAG GCGGCTTGTA CGTCAAGCGT CGCGCCGCGC GGCTGCACCG CAGCCTGCAG GAACTGGGCA AGCCCAACGT GATTGGCTCG ACCCTTGGCG CCATGGAATG GGTCAACCTG TTCGCTCTGG CGGTCAATGA AGAGAATGCC GCCGGTGGGC GTATGGTTAC CGCGCCCACC AACGGTGCCG CCGGTATTAT CCCGGCGGTA TTGCACTACT ACATGAAGTT CAATTCCAAC GCCTGCGACG CTGATGTCGT GGACTTCCTG CTTGGCGCAG CGGCAGTCGG CATCTTGTGC AAGAAGAATG CATCGATCTC CGGTGCCGAA GTGGGTTGCC AGGGGGAGGT CGGCTCAGCC TGCTCGATGG CCGCTGCTGG CCTGGCGCAG GTGCTGGGGG CTACGCCGCC GCAACTGGAA AATGCGGCCG AGATTGCCCT GGAGCACAAC CTTGGGCTGA CCTGCGACCC GGTGGGCGGC CTGGTGCAGG TGCCGTGCAT CGAGCGCAAT GCGATTGCTG CAGTCAAAGC GATCAACGCT GTACAGATGG CGCTGCGGGG AGATGGCGAG CACTTCATCT CGCTCGACAG GGTCATCCGC ACCCTGCGTG ATACCGGTGC GGATATGCAT GCCAATTACA AGGAAACCTC GCGCGGCGGT TTGGCTGTTG CGTTTGTTGA GTGCTGA
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Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAAATF AQALREQGLL ARVTRVEVRL YGSLSATGVG HATDRACLLG LMGQWPDRID PATIESRIGQ ALQEHCLMLD GSHPLAFEYG RDMLLLDENL PYHPNAMSLE AMDGQGSLLC QTYYSVGGGF IVEQAEIDAP AGETNAVRLP YEFDSGAQLL ALCKGHDLSV AQLMMANECA WRPEAEVREG LLRIWAAMRE CVANGLRNEG ILPGGLYVKR RAARLHRSLQ ELGKPNVIGS TLGAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV LHYYMKFNSN ACDADVVDFL LGAAAVGILC KKNASISGAE VGCQGEVGSA CSMAAAGLAQ VLGATPPQLE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE HFISLDRVIR TLRDTGADMH ANYKETSRGG LAVAFVEC
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