Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2646 |
Symbol | |
ID | 5870435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2962305 |
End bp | 2963198 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547769 |
Product | bile acid:sodium symporter |
Protein accession | YP_001668881 |
Protein GI | 167033650 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.571018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.498047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCT CGCCCTTGCT CACAGCCTTT CTGCCGCTTG CCCTGGGCAT CATCATGCTC GGCCTGGGGT TGTCGCTCAC CCTGGCTGAT TTCGCTCGCG TGGTGAAGTA CCCCAAGCCG GTGGTGGTAG GCCTGGCCTG TCAGATCCTG CTGCTGCCGC TGGTGTGCTT CCTGATCGCC AACGGCTTTG GTCTGGAGTC TGCCTTGGCA GTGGGGCTGA TGCTGCTGGC CGCCTCGCCA GGCGGCACCA CGGCCAACCT GTTCAGCCAC CTGGCTCATG GTGACGTGGC GTTGAATATT ACCCTGACGG CGGTCAACTC GCTGATTGCG ATCCTGACCA TGCCGTTGCT GGTGAACCTG TCGCTGAGCT GGTTCATGGC TTCGGACCAG GCTATCCCAT TGCAGTTCGC CAAGGTCATG CAGGTGTTTG CCATTGTCTT GCTGCCGGTG GCGCTGGGCA TGCTGATTCG CCATTTCGCC CCGGCATTCG CCGCGCGCAT GGAAAAGCCG ATGAAACTGG TAGCGGCGCT GTTTCTGGCC TTCACCATCG TCTTGGCATT GGCCAAGGAC TGGCAGACCG TGGTCGAGTA CGCACCGGTG GTAGGCCTGG CCGCGCTGCT GTTCAACCTG CTGAGCCTGA CGGTGGGCTA TTGGGTACCA CGGCTGCTGA ACATCCCCAA GCGCCAGGCG ATTGCCATCG GCATGGAGAT CGGCATCCAT AACGGGACCT TGGCCATTGC CCTTGCATTG AGCCCGTCGC TGCTGAACAA CGCGACCATG GCAGTGCCGG CTGCGTTGTA CAGCCTGATC ATGTTCTTTA CTGCGGCTGG GTTCGGCTGG TGGGTCAGCC GAGGGCAGGT GGCGGCGCAA CCCAAAGGGG AAACGGCGAA TTGA
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Protein sequence | MTASPLLTAF LPLALGIIML GLGLSLTLAD FARVVKYPKP VVVGLACQIL LLPLVCFLIA NGFGLESALA VGLMLLAASP GGTTANLFSH LAHGDVALNI TLTAVNSLIA ILTMPLLVNL SLSWFMASDQ AIPLQFAKVM QVFAIVLLPV ALGMLIRHFA PAFAARMEKP MKLVAALFLA FTIVLALAKD WQTVVEYAPV VGLAALLFNL LSLTVGYWVP RLLNIPKRQA IAIGMEIGIH NGTLAIALAL SPSLLNNATM AVPAALYSLI MFFTAAGFGW WVSRGQVAAQ PKGETAN
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