Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2640 |
Symbol | |
ID | 5870429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2957003 |
End bp | 2957824 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547763 |
Product | Ku protein |
Protein accession | YP_001668875 |
Protein GI | 167033644 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.536145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.612342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGGG CAATCTGGAA AGGCGCCATC AGTTTTGGCC TCGTGCACAT CCCCGTGGCA CTCCATACCG CCGTGCGTAC CGAGCGGGTG GATTTCGACT GGCTCGACAA GCGCAGCATG GAGCCTGTGG GCTATAAGCG GGTGAACAAG GTGACCGGCA AGGAAATCGA CAAGGACAAC ATCGTCAAGG GCGTGGAATT CGAGAAGGGC CGCTACGTGG TAATCAGCGA GGAAGAGATC CGCAAGGCTC GGCCCGAAGC GACCCAGACC ATCGATATCT TTTCCTTCGT CGAAGCTGGC GAGATCCCAC TGCAGCATTT CGATACGCCG TACTACCTAA CCCCAGACCG CCGTGGTGGC AAGGTGTATG CCTTGCTGCG CGAGACGCTT CAGAAGACCG GCAAGGTGGC ACTGGCCACC GTGGTTCTGC ATACCCGCCA GCATCTGGCG CTGCTGCGCC CCCTGGACGA CGCGCTGGTG ATGATTACCC TGCGCTGGCC CGAAGAAGTA CGCGGGCTGG AGACGCTGGA ACTGGACAGC AGCGTGACGG ACAACAAGGT GGAGAAGCGC GAGCTGGACA TGGCCAAGCG TCTGGTGGAG GACATGAGCG AGCCTTGGAA GCCCGAGGCG TATCACGATG CCTTCCGCCA GACCATCATG GACCTGGTGG AAGAGAAGGC CAGCAAGGGC AAGATCGAGT CTGTGGTGAA CGGCGACGCT GCGAGTGCTG AAAAGGGTGC GGACATCCTC GACCTTACCG AACTGCTCAA GCGCAGCCTG GCAGGCAAGA AGCCGGCGAA GAAAGCGCGC AAGGCGTCAT GA
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Protein sequence | MARAIWKGAI SFGLVHIPVA LHTAVRTERV DFDWLDKRSM EPVGYKRVNK VTGKEIDKDN IVKGVEFEKG RYVVISEEEI RKARPEATQT IDIFSFVEAG EIPLQHFDTP YYLTPDRRGG KVYALLRETL QKTGKVALAT VVLHTRQHLA LLRPLDDALV MITLRWPEEV RGLETLELDS SVTDNKVEKR ELDMAKRLVE DMSEPWKPEA YHDAFRQTIM DLVEEKASKG KIESVVNGDA ASAEKGADIL DLTELLKRSL AGKKPAKKAR KAS
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