| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2625 |
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| Symbol | |
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| ID | 5870414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2942625 |
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| End bp | 2943857 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547748 |
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| Product | outer membrane porin |
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| Protein accession | YP_001668860 |
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| Protein GI | 167033629 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0951208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.228202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CGCACTTCAT GTCAGCCGCC TGGCTGGCCA CCCTCGCCCT GCCAATGCCG
GCGCTGGCGG ACTTCATCGG CGACAGCCAT GCACGCCTGG AGCTGCGCAA CCACTACATC
AACCGCGACT TCCGCCAAAG CAATGCGCCC CAGGCCAAGG CCGAGGAATG GGGCCAGGGC
TTCACCGCCA AGCTGGAGTC GGGCTTCACC GAAGGCCCCG TCGGCTTTGG CGTCGACGCC
ATGGGCCAGT TGGGCATCAA GCTCGACTCC AGCCGGGACC GTCGCAACAC CGGCCTGTTG
CCCTTCGGCC CGAACAGCCA TGAACCCGTC GACGACTACA GTGAGTTGGG CCTGACCGGC
AAGGTGCGGG TGTCCAAAAG CACCCTGCGC CTGGGCACCT TGCAGCCGAT TCTGCCGGTG
GTGGTGTACA ACGACACCCG ACTGCTGGCA TCCACCTTCC AGGGTGGCCT GCTGACCAGC
CAGGACCTCG AAGGCCTTAC TTTCAATGGC GGCCGCCTGA CCAAGGCCAA CCTGCGCGAT
TCCTCGGGCC GCGATGACAT CGGCTACGGC GCCGCGACCA GCGACCACCT GGACTTTGGT
GGTGGTAGCT ACGCCATCAC CCCGCAAACC AGCGTCAGCT ACTACTACGC CAAGCTTGAG
GACATCTATC GCCAGCAGTT CGTCGGCCTG ATCGATACCC GCCCATTGAG TGAAGGGGTG
AGCCTGCGCA GCGACCTGCG CTATTTCGAC AGCCGCAATG ATGGCGCCGA GCGTGCCGGC
AACATCGATA ACCGCAACTT CAACGCCATG TTCACCCTGG GTGTACGGGC GCACAAGTTC
ACCGCCACCT GGCAGCAGAT GTCCGGTGAC AGCGCCTTCC CGTTCGTCAA CGGTGGCGAC
CCGTTCACCG TCAACCTGGT CACCTACAAC ACCTTCACCC GGGCCGGGCT GGACTCGTGG
CAAGTGCGCT ACGACTACGA TTTCGTTGCC ATGGGTATCC CTGGCCTGAG CTTCATGTCC
CGTTACACCG ACGGCCGCCA TGCGCAAACC GCCACCGTCA GCAATGGCCG CGAGCGCGAG
CGCGATACCG ACATCACCTA TGTCATCCAG AGCGGCCCGT TCAAAGACGT CAGCCTGCGC
TGGCGCAACG TCACCTTCCG CTCCGGCAAT GGCCTGACCA ACGCCGTTGA CGAGAACCGC
CTGATCATCG GTTACACCCT GGCGCTGTGG TAA
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| Protein sequence | MNRTHFMSAA WLATLALPMP ALADFIGDSH ARLELRNHYI NRDFRQSNAP QAKAEEWGQG
FTAKLESGFT EGPVGFGVDA MGQLGIKLDS SRDRRNTGLL PFGPNSHEPV DDYSELGLTG
KVRVSKSTLR LGTLQPILPV VVYNDTRLLA STFQGGLLTS QDLEGLTFNG GRLTKANLRD
SSGRDDIGYG AATSDHLDFG GGSYAITPQT SVSYYYAKLE DIYRQQFVGL IDTRPLSEGV
SLRSDLRYFD SRNDGAERAG NIDNRNFNAM FTLGVRAHKF TATWQQMSGD SAFPFVNGGD
PFTVNLVTYN TFTRAGLDSW QVRYDYDFVA MGIPGLSFMS RYTDGRHAQT ATVSNGRERE
RDTDITYVIQ SGPFKDVSLR WRNVTFRSGN GLTNAVDENR LIIGYTLALW
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