Gene PputGB1_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2623 
Symbol 
ID5870412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2940718 
End bp2941026 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content62% 
IMG OID641547746 
Producthypothetical protein 
Protein accessionYP_001668858 
Protein GI167033627 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.310407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG AACGCATAGA AAGCATCGCC AACCACCCCG ACTTCCAGCA CCTGGTGCGG 
CGCAAGCGCC GTCTCAATGG CAGCCTGACC CTGGCCATGC TGGTGATCTA CTACGGCTTC
GTCCTGCTGG TGGCGTTCTC GCCCAGCACA TTGGGCCAGT CCCTCAGCGG CGGCGTGACC
ACTGTCGGCA TGCTGGTGGG CGTGCTGATG GTGCTGCTGT CCTTCGCCCT TACCGGCATC
TATGTGCACC GCGCCAACAA CGTGCTCGAC CCGCTCAACG ACAAGGTCAA GCAGGAGTGC
GCACAATGA
 
Protein sequence
MTPERIESIA NHPDFQHLVR RKRRLNGSLT LAMLVIYYGF VLLVAFSPST LGQSLSGGVT 
TVGMLVGVLM VLLSFALTGI YVHRANNVLD PLNDKVKQEC AQ