| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2610 |
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| Symbol | |
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| ID | 5870399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2928506 |
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| End bp | 2929510 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547733 |
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| Product | PaaX family transcriptional regulator |
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| Protein accession | YP_001668845 |
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| Protein GI | 167033614 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.218497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0704814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGG CAGTGACACG CCATGGCCAG GCGGCCCGCC GCACAGGTAT AGTCGGTGCT
TTCTCCGCGC ACAGTTCGCC CATGAGCAAT CTTGCCCCAC TGAACAATTT GATTACCCGC
TTTCAGGAGC AGACGCCGAT TCGCGCCAGC TCTCTGATCA TCACGTTGTA CGGCGATGCC
ATCGAGCCCC ACGGCGGGAC AGTCTGGCTA GGTAGCCTGA TCAATCTGCT GGAGCCGATC
GGCATCAATG AACGGCTGAT CCGCACATCG ATCTTTCGCC TGACCAAAGA AGGTTGGCTT
ACCGCTGAAA AGGTTGGCCG GCGCAGTTAC TACAGCTTGA CGGGCACTGG CCGCCGACGT
TTCGAAAAAG CCTTCAAACG CGTCTACAGC CAGAGCCAGC CCGCTTGGGA CGGCGCCTGG
ACGCTGGTGT TGCTGTCACA ACTCGAGGCT GGCAAGCGCA AGGCCTTGCG TGAAGAGCTG
GAATGGCAGG GGTTCGGCGT CATGGCCCCG AACCTGCTGG GCTGCCCAAG GGCTGACCGT
GCCGACCTGG CTGCCACGTT GCGCGACCTT GAAGCCAGTG ACGACAGCAT CGTCTTCGAA
ACCCACACCC AGGAAGTTCT CGCGTCCAAG GCCATGCGCG CCCAGGTGCG GGAAAGCTGG
CGTATCGAAG AGCTGGGGGA GCAGTACAGC GAGTTCATCC AGCTGTTCAG GCCGCTTTGG
CAAGGTTTGA AAGAGCAACA ACTGCTGGAT GCGCAAGATT GCTTCCTTGC ACGCACACTG
CTGATACACG AGTACCGCCG CCTGCTGCTG CGCGACCCGC AACTACCGGA CGAGCTGCTG
CCAGGAGATT GGGAGGGAAG GGCTGCGCGA CAACTGTGCC GCAATCTCTA TCGGCTGGTG
TTTGCCAAGG CAGAGGAATG GTTGAACGCT GCGCTGGAAA CCGCAGACGG ACCATTGCCG
GATGTGAACG AGAGCTTCTA CAAGCGTTTT GGTGGGTTGG CCTGA
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| Protein sequence | MNLAVTRHGQ AARRTGIVGA FSAHSSPMSN LAPLNNLITR FQEQTPIRAS SLIITLYGDA
IEPHGGTVWL GSLINLLEPI GINERLIRTS IFRLTKEGWL TAEKVGRRSY YSLTGTGRRR
FEKAFKRVYS QSQPAWDGAW TLVLLSQLEA GKRKALREEL EWQGFGVMAP NLLGCPRADR
ADLAATLRDL EASDDSIVFE THTQEVLASK AMRAQVRESW RIEELGEQYS EFIQLFRPLW
QGLKEQQLLD AQDCFLARTL LIHEYRRLLL RDPQLPDELL PGDWEGRAAR QLCRNLYRLV
FAKAEEWLNA ALETADGPLP DVNESFYKRF GGLA
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