Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2609 |
Symbol | |
ID | 5870398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2927337 |
End bp | 2928368 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641547732 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001668844 |
Protein GI | 167033613 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.580365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0683488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA TCGTAACCGG CGCCGCGGGA TTCATCGGCA GCAATCTCGT TCAGGCACTC AACCAACGCA ACGAGACCAA TATCATTGCC GTCGACGATC TGACCGATGG CGACAAGTTC AGCAACCTGG CCGACAGTGA AATTGCCGAT TACCTGGACA AGGACGATTT TCTCGACCGG TTCGGTCGCG GCCAGTTTGG CAAGGTGCGC GCCGTTCTGC ACCAGGGTGC GTGTTCAAGC ACCGTCGAAG GCGACGGTCG TTTCATGATG GACAACAACT ACCGGTTCAG CCGTGAGTTG CTGACGTCTG CACAGCACCA GGAAATCCCG CTGCTATATG CATCATCGGC CGCCGTATAC GGCGCAGGAC GCATCTTTAG CGAACAGCGT GAGTGTGAAC GCCCGCTGAA CGTCTATGGC TATTCCAAGT TTCTGTTCGA TCAACAGGTG CGCCGGCAAC TGACGGCGGC TCGCAGCCAG GTCGTCGGCT TGCGTTATTT CAATGTCTAC GGGCCCCATG AGCAGCATAA AGGCCCGATG GCCTCAGTGG CCTTGCACTG CTTCAATCAG TACCAGGCTC GCGGAAAAGT CAGCTTGTTC GGTAGCTATG GGGACTTCCC CAGCGGTGGC CATCTGCGGG ATTTCGTCTC TGTTGAGGAT GTGGTCAAGG TCAATATGTT CTTCCTTGAA CGACCACAAC TCAGTGGCAT ATTCAATGTT GGCAGTGGTC GTGCCCAGCC ATTCAACGAC GTTGCTCTGG CTGTGATCAA TCGGCTGCGC GAACGGCAAG ACCTACCCCC TTTGTCGCTT GATATGGCCT TGCTTGAGGG GGTACTGGAG TACAGCGAAT TTCCTGATCA TTTGCGTGGC AAATACCAGT GCTACACCTG TGCCGACCTG GAGCGCTTGC GCGCTGCTGG TTACAAGGCG CCTACATTGA CAGTCCAGCA AGGCGTGGCC CGCTACTGTG ACTGGTTGCA GGGTAACCAA AGCCCGCCGC CCGCTCCTTT CAAGCAAGCG GCGGCAGCTT GA
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Protein sequence | MTIIVTGAAG FIGSNLVQAL NQRNETNIIA VDDLTDGDKF SNLADSEIAD YLDKDDFLDR FGRGQFGKVR AVLHQGACSS TVEGDGRFMM DNNYRFSREL LTSAQHQEIP LLYASSAAVY GAGRIFSEQR ECERPLNVYG YSKFLFDQQV RRQLTAARSQ VVGLRYFNVY GPHEQHKGPM ASVALHCFNQ YQARGKVSLF GSYGDFPSGG HLRDFVSVED VVKVNMFFLE RPQLSGIFNV GSGRAQPFND VALAVINRLR ERQDLPPLSL DMALLEGVLE YSEFPDHLRG KYQCYTCADL ERLRAAGYKA PTLTVQQGVA RYCDWLQGNQ SPPPAPFKQA AAA
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