Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2584 |
Symbol | |
ID | 5870373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2901422 |
End bp | 2902303 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547707 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001668819 |
Protein GI | 167033588 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.156706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.234942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA AGGCATTGCG TTGCTGTGTC GAAATCGTCC GGCAAGGCAG CTTCACCAAG GCCGCGCAGC ACCTGCACAT CGCCCAGCCA GCGCTGAGCA TGGCCGTTAC CCGGCTGGAA GAAGAACTGG GCGTCACCCT GTTCAACCGC ACCACGCGCA AAGTGATCCT CACGGCAGAA GGCGAGCAAT TTCTGCCACG CATTGCCTCG GCCCTGCGCG AGATGGATGT TGCCCGACAA GAACTGCGCG ACATGGCCGA CCTGAAGCGC GGCGAAGTGC GCCTGGGTAT TCCGCCGATG TTCGGCCTGC ACTACGTGCC CGGTTTGATG AACGCCTTCC GCCAGTTGTA CCCAGGCATT GCCATGACCG TGTTCGAAGG CAGTGCCGAA GACATTGGCC ATCGGCTGGA GCAGCGGGAA ATCGACCTCG CACTGCTGGA GTCCCGGCGT GTGCCGCCGG ACAAGGAATC GATCCTGCTG GGCAGCGACG AGATGCTGGC GTGCATGCAC CCCGATCACC CCTATGCCGG CAAGGCTTTC CTCACCGCCG AAGACCTGCG TAATACCGAC ATGGTGGTGT TCGACCGCAC CTTCGTGCAA CGCCATCTGC TGGACGCGTT CTTTGCCGAG CATGGCATCA CTTACCAAGT GGCGCTGCAG AGCAACTTCG TCTCGCTTGT GGTGCAGGCC GCATTGGACA ACATGGGGGT GGCCACCCTG CTGCGCTCGG TGCAACAGCG CACGCCAGGC ATCGTCGGTG TGCCCTTCCG GCCGGCACAG CAGATGAGTT TCCGCTTGTG CTGGCGCTCG GGGGAATACC TTTCGCTCGC CAGCAAACGG TTCATCGACT TTGCCGCGCA AACCCACTAC CTGGAGCGAT AA
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Protein sequence | MNLKALRCCV EIVRQGSFTK AAQHLHIAQP ALSMAVTRLE EELGVTLFNR TTRKVILTAE GEQFLPRIAS ALREMDVARQ ELRDMADLKR GEVRLGIPPM FGLHYVPGLM NAFRQLYPGI AMTVFEGSAE DIGHRLEQRE IDLALLESRR VPPDKESILL GSDEMLACMH PDHPYAGKAF LTAEDLRNTD MVVFDRTFVQ RHLLDAFFAE HGITYQVALQ SNFVSLVVQA ALDNMGVATL LRSVQQRTPG IVGVPFRPAQ QMSFRLCWRS GEYLSLASKR FIDFAAQTHY LER
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