| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2568 |
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| Symbol | |
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| ID | 5870357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2884449 |
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| End bp | 2885411 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547691 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001668803 |
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| Protein GI | 167033572 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00217021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.110427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC GAATTGTTCT GTATAAACGC CTGCCCGCTG ACTTGATGGC ACGCCTGCAA
GCGCGCGTTG AGGTGACCTG GGTAGATACG GCCCAGCCCG ATGGCCTGGC CCGCTTGCGC
GATGCGTTGC CGGGCGCACA CGGGTTGCTC GGGGCCAGTG TGCGCCTGGA TGCCAGCCTG
CTAGACCTGG CGCCTCAGCT GGAAGTGGTG TCCAGCGTTT CGGTGGGCGT GGACAACTAC
GATGTTGCCG AACTCAGCCG CCGTGGTGTG AAGCTGACCA ACACGCCCGA CGTGTTGACC
GAAACCACCG CCGACACCGG CTTTGCCCTG CTCCTGGCCA CCGCCAGGCG GGTGGTGGAG
CTGGCGAACT GGGTGCGTGA TGGCCATTGG CAGGCCAACC TGGGGCCTGC GCATTTTGGC
AGTGATGTGC ACGGCAAGAC GCTGGGCATC GTCGGCATGG GCCGCATCGG CGAGGCCTTG
GCCCGGCGCG CATCCGCCGG CTTTGGCATG CGTGTGCTGT ACCACAGCCA GCGCCCCAAG
CCCGAGGTGG AGGCACGCTA TGGCGCAAGC AAATGCAGCC TGGATGCCTT GTTGCAGCAG
GCGGATTTCG TTTGCCTGAC GGTGCCGCTG AACGCCAGCA CCGAAGGCCT GATCGGCACA
CGGGAACTGG CGTTGATGAA GCCCGAAGCA ATCCTGGTGA ACATCTCGCG TGGGCGTGTG
GTGGATGAAC AAGCGCTGAT CGAAGCGCTG CGGAACCGGC GCATTCGCGG CGCGGGGCTT
GATGTGTTCG TGCAGGAGCC GCTGGCGACA GACTCGCCGC TATTGCAGCT CGATAACGTG
GTAGCCACCC CGCATATCGG CTCAGCGACC GAGGAAACCC GCCAGGCCAT GGCGCGTTGC
GCGGTGGACA ACCTGCTCAG CGCGCTGGCC GGTGAGCGGC CGTTGAACCT GGTCAACGGC
TAG
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| Protein sequence | MKKRIVLYKR LPADLMARLQ ARVEVTWVDT AQPDGLARLR DALPGAHGLL GASVRLDASL
LDLAPQLEVV SSVSVGVDNY DVAELSRRGV KLTNTPDVLT ETTADTGFAL LLATARRVVE
LANWVRDGHW QANLGPAHFG SDVHGKTLGI VGMGRIGEAL ARRASAGFGM RVLYHSQRPK
PEVEARYGAS KCSLDALLQQ ADFVCLTVPL NASTEGLIGT RELALMKPEA ILVNISRGRV
VDEQALIEAL RNRRIRGAGL DVFVQEPLAT DSPLLQLDNV VATPHIGSAT EETRQAMARC
AVDNLLSALA GERPLNLVNG
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