Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2543 |
Symbol | |
ID | 5870332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2855207 |
End bp | 2856181 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641547666 |
Product | hypothetical protein |
Protein accession | YP_001668778 |
Protein GI | 167033547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.393427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00552754 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTACCA CGACCTTTTC ACAACACCCT TGTTTGCAAA AGCACTTCGA TCATTCTTGG CAGGCAAACA ATTCGCTGCG CCAGGCCATG CAGTACGCCC TCGCTCCGCT GGTCAGGCAA GCCCCCGTTT CTGTTGTTGT CGTGGGGTCT TACGGGCGGT GCGAGGTCTC GCGTATTTCG GACATCGATT TTTTCATCGT GCATGACGGC AGCATGTCTG AGGCCCGGCT GCTCGACGTA CTGCATCAAG TCAAAAACCT GGTTCGACCG CTCAGCTGGC CGGGTGAGAG CGATGAGTCC AAGTTTGGTC AGGGCGCGCT TTCACTCTAT TCGGAGTTGA GCAACCACAT TGGATGGAAG CAGGAAAGCA ATACGGCGCT CACCCGACGA ATGCTGCTCC TGCTGGAAGG CCGCCCACTG TTTGGCGATG AGAGTTTCAC TCGGTGGCGA ACTGAGTTGC TGTGCCGGTA TGTGGCAAGC GACCAAGGAA CAGGGTTGCC CAGGTTCATG CTTAATGATG TGGTTCGGTA TTACCGCAGC ATGATGGCGA ACTTCGAGGA AAAGCGGGCT GAAGGCAAGG CTTGGGGCGT GCGTAACATC AAGCTGAAGT TCTCTCGCAA GCTGCTTTAC CTGGGAGGGA TCGTGGTGAT TGCCGAGGCC CATGGTCTAC CGGCCAGTGA AAAGATTAAA CGCCTCGACC ATTGGCTTTC ATTCACACCG CTACAACGCG TTGCGATGCT GGGACAGTCA AACCCCCATA CTGGGCAGTT GCTAGAGCAG TATGCCTTGT TCCTGGACTT GATATCTTCA CTGGAAAATC GTCGTCGCTT GGACTCACTG AGCCCAGAAT ACGCACGGAC AGATCCTCTC TATCGAGAAA TTTCCATCGT AGGCAAGGCA TTTTCCGAGG GGCTTGAGCA ATGGCTCGCA GCCCAGTATC CAGGCCACCC AATCCTGCAC GCAATGCTTT TCTGA
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Protein sequence | MITTTFSQHP CLQKHFDHSW QANNSLRQAM QYALAPLVRQ APVSVVVVGS YGRCEVSRIS DIDFFIVHDG SMSEARLLDV LHQVKNLVRP LSWPGESDES KFGQGALSLY SELSNHIGWK QESNTALTRR MLLLLEGRPL FGDESFTRWR TELLCRYVAS DQGTGLPRFM LNDVVRYYRS MMANFEEKRA EGKAWGVRNI KLKFSRKLLY LGGIVVIAEA HGLPASEKIK RLDHWLSFTP LQRVAMLGQS NPHTGQLLEQ YALFLDLISS LENRRRLDSL SPEYARTDPL YREISIVGKA FSEGLEQWLA AQYPGHPILH AMLF
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