| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2505 |
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| Symbol | |
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| ID | 5870294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2810733 |
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| End bp | 2812856 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547628 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001668740 |
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| Protein GI | 167033509 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGCG ATGCATGCTG TGCTAAGTTG AATGAATTCA CAGCTGGAGC CACGACATTG
GTCGCAAACG GTACGCCACG CGAGCCTGTA CCGCAGGCTA TACGGCAGTC GCTTGTTTCG
TCATCGATCA AGCCGATGGG GGAACGCATC GCCCAGTTCG AGTGGGGGCA TACCTCGCTC
GGGCCATTGC CGCGCTGGCC GGCTTCATTG CGCATTGCTG TAGACATGAT GCACTTGTCG
CCGTTCCCGT GTGCGGTGGT CTGGGGGCCT GACCTCTGTG TGGTGCACAA CGATGGCTAT
CGGGCGCTGC GGGCTGTTAC CCATGATGCG CTGGGTAAGA CGTTCGATGC CCTTTGGCAT
GATGTCTGGC CAGCAGTGGG GCCTTGGGTG TTCAACGTAC TTGAGGGGCG CTCGAGTTTC
GTCGAGGACC CACCCCTGCG AATCGTCCGG GGCGAAGGCG CCGAGCCGCT ATGGTGCGCG
TTCGGTTATG CCCCCCTGCA TGATGAACTC GGTAACGTGG CCGGGTTTCT GCATACGGTG
ATCGAAACCA CGGCCAGCGT CGAGGCGCAC CGTCACTGGC GTGAGCAGGC GCAGGGATTT
GAACGGCAGG TCGAGCGCCA TGTGGCCGAG CGCGAGCAGT TCTGGCAGCT GTCGCGCGAC
GCCATAATGA CGATTACCCC GGAACTGAAA CTGCATGCCG CCAACCCGGC CTGGCACCGC
ATTTTGGGGT GGCCTCAAGA ACAGGTGCAG GACATACCGA TACTGGAGCT GGTTCACCCC
GCCGATCGTG TCGAAGTGCA AGTGGCAGTG TCGGGGCTAC TGCAAGACAG TCATGCGGAA
CAGATCGAGA CCCGTCTGCG CCACCGCGAT GGTCACTACC ACTGGTTTTG CTGGAGTGCG
CGGTTTGATG GCAGCCTTCT GAACGTGGTT GGCCGGGACA TTACCGCAGA GCGCGAAGAG
GCTGCACGTC AGTCCGAGGC GCTGATGCGC AGCAGCGAGC GTATGGAGGT GGTAGGCCAG
TTGGCGGGTG GCATGGGCCA TGAAATGAAC AACTTGCTGT CCGGTATTGG TGGCAGCCTC
GAATTGCTGC AGCGGCGCCT GCAGGACGGG CGCCTGGAGC GAGTGGAGGC TTATGTGGAG
GTCGCGCGTG ACTCAGTGCA GCGTGCGATG GAACTGACTC ATCGCTTGCT TGCGTTTTCT
CGCCATCAGC CGTTGGCACC TGGACCGCTG AATTTCAATC GGCAGTTACG TCAGAGCGAG
CCGCTGTTAT TGCAGGCGCT GGGGGCAGAG ATGCGTTTGC ACTGGCAACT GGATGTTGCG
CACTGGGCGG TGAACTTGGA CGTGCGCCAG CTTGAAAATG CGCTGATCAA TTTGTGCGCC
AATGCCCGTG AGGCATGCCT GGCGCAAGGC AATGTCACCA TCAGCAGCGT CAACGAACGG
CTGACTGCCT TTTTCCCGGA TGAGGGTGGC TTGCCCCCAG GCGACTACGT GGCTTTGCAT
GTCGAGGACG ATGGCCATGG CATGGCGGCG GTAGATATCC CCAGGGCATT TGAACCGTTC
TTCACCACCA AACCCGTCGG GCGTGGGTCC GGCCTTGGTT TGTCGATGGT TTATGGCTTT
GTCGGCCAGT CGGGCGGGTA TGCCTGGATC GAGTCGACCC AGGGAAAGGG CACCAAGGTT
TCCATGCTTT TCCCTCGGTG CCATGAGCCG GTACCGGACG AGGTCACGCC GGCACCGCGT
CCGCAGCGTA TGGCAAGAGG CGAGCGCCTG CTGTTGGTCG ATGATGAGCT TAACTTGCGC
GCGGTGATGC GCGAATACCT GACTGAGCGT GGTTTCAACG TGACCGACGT GGGCGATGCC
AATACTGCGC TGGACCGCTT CCGCCATGGC GGCCCCTTCG ATTTGGTAAT CACCGACATC
GGCCTGCCGG GTGGTTTCAG TGGTCGGCAA GTGGCCAAGG CCATGCGCAT GCAACTTGAA
CAGCAGAAGA TTCTGTTTAT CACAGGCTAT GCGGATCAGC CGATTGAAGC GCAACTGCTC
GGCCAGCCGG GCACGGCGTT AATGAATAAA CCGTTCTCGC TGGCGGACCT TGCCGACGAA
GCGATACGCG TGCTTGATGA GTAG
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| Protein sequence | MVCDACCAKL NEFTAGATTL VANGTPREPV PQAIRQSLVS SSIKPMGERI AQFEWGHTSL
GPLPRWPASL RIAVDMMHLS PFPCAVVWGP DLCVVHNDGY RALRAVTHDA LGKTFDALWH
DVWPAVGPWV FNVLEGRSSF VEDPPLRIVR GEGAEPLWCA FGYAPLHDEL GNVAGFLHTV
IETTASVEAH RHWREQAQGF ERQVERHVAE REQFWQLSRD AIMTITPELK LHAANPAWHR
ILGWPQEQVQ DIPILELVHP ADRVEVQVAV SGLLQDSHAE QIETRLRHRD GHYHWFCWSA
RFDGSLLNVV GRDITAEREE AARQSEALMR SSERMEVVGQ LAGGMGHEMN NLLSGIGGSL
ELLQRRLQDG RLERVEAYVE VARDSVQRAM ELTHRLLAFS RHQPLAPGPL NFNRQLRQSE
PLLLQALGAE MRLHWQLDVA HWAVNLDVRQ LENALINLCA NAREACLAQG NVTISSVNER
LTAFFPDEGG LPPGDYVALH VEDDGHGMAA VDIPRAFEPF FTTKPVGRGS GLGLSMVYGF
VGQSGGYAWI ESTQGKGTKV SMLFPRCHEP VPDEVTPAPR PQRMARGERL LLVDDELNLR
AVMREYLTER GFNVTDVGDA NTALDRFRHG GPFDLVITDI GLPGGFSGRQ VAKAMRMQLE
QQKILFITGY ADQPIEAQLL GQPGTALMNK PFSLADLADE AIRVLDE
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