| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2484 |
|---|
| Symbol | |
|---|
| ID | 5870273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2780845 |
|---|
| End bp | 2782143 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547607 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001668719 |
|---|
| Protein GI | 167033488 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.280343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA TCCTGGTGCG GCTGTACCTG GTGATCATCG TCGCCTACGC CGGCGCGTTG
CTGTTCATCC CCGACACCAT CGTTGGCCTG TTCCGCGAGC GCTTCATGGC CTACAACCTG
GACCAGGCAA AGGGTGTGCA GGCGTTGATC GTACGCCAGT TCCGCCAGGC CCCGCGTGAG
CAGTGGCCGG CGGTGGAGCA GGAACTGGCC GGTGATTTTG CGCCGCTGGA GCTGAAACTG
CTGCGCATGG ACCAGGCGGG TTTGAGCGAG GAAGAACAGG CACGCCTGGA GCATGGCCTG
TACGCGGTAC GTATTGCCGA GTGGGGCTAC TACGAAACGG TGCTGGCGCC GCTGGACAAG
CAATGGCTGG TGCGCCTGCA TTCGCCGCCA GACCCGCTGG ACATCAACGT GCTGTCGTGG
GGCGTGACGG TGCTGATCGG TGCGGCCATG CTCGGGTGCC TGCTGCTGTG GGTCTGGCCG
CACTGGCGCG ACCTGGAGCG CCTCAAGGAG ACCGCTCGGC GCCTGGGCCA AGGGCAGATG
GCCGAGCGCA CGCACATTTC ACCACACTCC AACATCGGTG AGCTGGCCGG GGTTTTCGAC
ACCATGGCCA GTGACCTGGA GCGCCACGTC AACCAGCAGC GCGAGCTGCT CAATGCGGTA
TCGCACGAGT TGCGCACGCC GCTGACCCGG CTGGATTTCG GCCTGGTGCT GTTGTTCGAC
GAAGTGCCGC CGGCCAGCCG CAAGCGCCTG CTGGAACTGG TCGGGCATGT ACGCGAACTG
GACGAGCTGG TACTGGAGTT GCTGTCCTAT AGCCGCTTGT ACAACGCTGA CCAGGCTCGC
GAACGGGTCG AAGTGTCGCT GCTGGAGCTG GTCGACAGTG TGCTTGGCAG CTTTGCCGAG
GAGCTTGATG GCCGTGGTAT CCAGTGGGAA GTGCGGGCCG AAGGTGACCT GCCGCGCTTT
GTGCTGGACC CTCGGCTGAC GGCGCGCGCG GTGCAGAACC TGGTGCGCAA TGCCATGCGC
TATTGCGACG AAAGCCTGTT GTTGCGCTTG CGCCTGGAAG AGGATGGCGC CTGCCTGCTG
ACGGTGGAGG ATGACGGGAT TGGCATTCCG GTGGAGGAGC GCGAGCGCAT TTTCCAGCCG
TTCTACCGGC TAGACCGAAG CCGCGACCGA AATACCGGTG GGTTTGGCCT GGGGCTGGCG
ATCAGCCGGC GGGCCATCGA GGGGCAGGGT GGTACCTTGA CCGTGGCACA GTCGGCGCTG
GGTGGGGCGC AGTTCAGGAT TCGCTTGCCA GCCGGGTAG
|
|---|
| Protein sequence | MLKILVRLYL VIIVAYAGAL LFIPDTIVGL FRERFMAYNL DQAKGVQALI VRQFRQAPRE
QWPAVEQELA GDFAPLELKL LRMDQAGLSE EEQARLEHGL YAVRIAEWGY YETVLAPLDK
QWLVRLHSPP DPLDINVLSW GVTVLIGAAM LGCLLLWVWP HWRDLERLKE TARRLGQGQM
AERTHISPHS NIGELAGVFD TMASDLERHV NQQRELLNAV SHELRTPLTR LDFGLVLLFD
EVPPASRKRL LELVGHVREL DELVLELLSY SRLYNADQAR ERVEVSLLEL VDSVLGSFAE
ELDGRGIQWE VRAEGDLPRF VLDPRLTARA VQNLVRNAMR YCDESLLLRL RLEEDGACLL
TVEDDGIGIP VEERERIFQP FYRLDRSRDR NTGGFGLGLA ISRRAIEGQG GTLTVAQSAL
GGAQFRIRLP AG
|
|---|
| |