| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2453 |
|---|
| Symbol | |
|---|
| ID | 5870242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2747746 |
|---|
| End bp | 2748276 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641547576 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001668688 |
|---|
| Protein GI | 167033457 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGAG TATTGGTAGT CGATGACGAA CAGACTCTTG CGCAGAACCT GCAAGCGTAC
CTGCAGGCGC AAGGCCTGGA AGTTCATGTT GCCCACGACG GTGCCAGTGG TATCGAACAG
GCTGAAAGCC TGGCACCGCA AGTAGTTGTG CTGGATTACC GCTTGCCCGA CATGGAGGGT
TTTCAGGTTC TGGAGGCTGT ACGCAAGAAC AGGCAATGCC ACTTCGTGCT GATTACCGCC
CATCCCACCG TCGAGGTGCG TGAGCGGGCC GCCGAACTGG GTGTGAGTCA TGTCCTGTTC
AAGCCGTTCC CACTGGTGGA ACTGGCCCGT GCAATCTTCG ACCTGATGGG CATTGAGCGC
CGGCGCAGGG CCACGGACAA CCCGGCAGAA GGGTTCGTCG AACGACGCCA GAACAGGAAC
GAATCGTTCC CCCTGCAGTT GTACGATGGA AGCTGGGTAT TGGCCGACCG CCGCCGTAAT
GGCGTCAAGC CGCCAGGGCC CGACGACGAT CAACTGCTCA CAGGGGAATA G
|
|---|
| Protein sequence | MNRVLVVDDE QTLAQNLQAY LQAQGLEVHV AHDGASGIEQ AESLAPQVVV LDYRLPDMEG
FQVLEAVRKN RQCHFVLITA HPTVEVRERA AELGVSHVLF KPFPLVELAR AIFDLMGIER
RRRATDNPAE GFVERRQNRN ESFPLQLYDG SWVLADRRRN GVKPPGPDDD QLLTGE
|
|---|
| |