| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2417 |
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| Symbol | |
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| ID | 5870206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2701846 |
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| End bp | 2702865 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547540 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001668652 |
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| Protein GI | 167033421 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.204279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG AAAGCATTAA TTGGGACAAG CTGGGTTTCG ACTACATCAA GACCGACAAA
CGCTACCTGT CCGTATGGCG CAATGGCGAG TGGGACAAGG GCACCCTGAC CGAAGACAAC
GTACTGCACA TCAGTGAAGG CTCCACGGCC TTGCACTATG GCCAGCAGTG CTTCGAAGGC
CTGAAGGCCT ACCGTTGCAA GGACGGCTCG ATCAACCTGT TCCGCCCAGA CCAGAACGCC
GCTCGCATGC AGCGCAGCTG CGCTCGCCTG CTGATGCCGC ACGTGCCGAC CGATGTGTTC
ATCGAAGCGT GCAAGCAAGT GGTCAAGGCC AACGAAAAAT TCGTGCCACC GCACGGCAAA
GGCGCCCTGT ACCTGCGCCC GTTCGTGATC GGCACCGGCG ACAACATTGG CGTGCGCACC
GCCCCCGAGT TCATCTTCTC GGTGTTCGCC ATCCCGGTTG GCTCGTACTT CAAGGGCGGC
ATGAAGCCGC ACAACTTCCA GATTTCCAGC TTCGACCGTG CCGCCCCGCA AGGCACCGGC
GCAGCCAAGG TCGGCGGCAA CTACGCTGCC AGCCTGCAAC CGGGTGCTGA AGCGAAGAAA
GCCAACTTCG CCGACGCCAT CTACCTCGAC CCGCTGACCC ACACCAAGAT CGAGGAAGTC
GGTTCGGCCA ACTTCTTCGG CATCACCGCC AACAACGAGT TCGTGACCCC GAAATCGGCT
TCGGTGCTGC CCGGTATCAC CCGCCTGTCG CTGATGGAAC TGGCGCAATC GCGCCTGGGC
CTGACCGTGA TCGAAGGCGA TGTCGAAATC AACAAGCTGG ACCGCTTCAT CGAAGCGGGT
GCCTGCGGTA CCGCTGCGGT GATCACCCCG ATCGGCGGCA TCGAGTACAA CGGCAAGCTG
CACGTATTCC ACGACCTGGA AAAGGTCGGC CCGGTTACCC AGAAGCTCTA CAACGAGCTG
ACCGGCATCC AGAGCGGTGA CGTTGAAGCA CCGGCTGGCT GGATCGTCAA AGTCGCCTGA
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| Protein sequence | MSNESINWDK LGFDYIKTDK RYLSVWRNGE WDKGTLTEDN VLHISEGSTA LHYGQQCFEG
LKAYRCKDGS INLFRPDQNA ARMQRSCARL LMPHVPTDVF IEACKQVVKA NEKFVPPHGK
GALYLRPFVI GTGDNIGVRT APEFIFSVFA IPVGSYFKGG MKPHNFQISS FDRAAPQGTG
AAKVGGNYAA SLQPGAEAKK ANFADAIYLD PLTHTKIEEV GSANFFGITA NNEFVTPKSA
SVLPGITRLS LMELAQSRLG LTVIEGDVEI NKLDRFIEAG ACGTAAVITP IGGIEYNGKL
HVFHDLEKVG PVTQKLYNEL TGIQSGDVEA PAGWIVKVA
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